Publications associées à Spotiflow: accurate and efficient spot detection for fluorescence microscopy with deep stereographic flow regression

Publications associées (21)

FADE: Forecasting for anomaly detection on ECG

David Atienza Alonso, Denisa-Andreea Constantinescu

Background and Objective: Cardiovascular diseases, a leading cause of noncommunicable disease-related deaths, require early and accurate detection to improve patient outcomes. Taking advantage of advances in machine learning and deep learning, multiple app ...

Elsevier BV2025

From Prediction to Prescription: Machine Learning and Causal Inference for the Heterogeneous Treatment Effect

Elise Hélène Dumas

The increasing accumulation of medical data brings the hope of data-driven medical decision-making, but data's increasing complexity—as text or images in electronic health records—calls for complex models, such as machine learning. Here, we review how mach ...

Annual Reviews2025

Anomaly Anything: Promptable Unseen Visual Anomaly Generation

Olga Fink, Han Sun

Visual anomaly detection (AD) presents significant challenges due to the scarcity of anomalous data samples. While numerous works have been proposed to synthesize anomalous samples, these synthetic anomalies often lack authenticity or require extensive tra ...

2025

Automatic identification of atmospheric bioaerosol using real-time imaging and fluorescence

Sophie Catherine Erb

Since the 1960s, the prevalence of pollen allergy has increased worldwide in developed countries and this trend is continuing, exacerbated by climate change. In the 20th century, operational pollen monitoring networks have been set-up to respond to the nee ...

EPFL2025

GeoDistill: Geometry-Guided Self-Distillation for Weakly Supervised Cross-View Localization

Alexandre Massoud Alahi, Zimin Xia

Cross-view localization, the task of estimating a camera's 3-degrees-of-freedom (3-DoF) pose by aligning ground-level images with satellite images, is crucial for large-scale outdoor applications like autonomous navigation and augmented reality. Existing m ...

2025

Nonparametric network summaries

Arthur Verdeyme

This thesis is concerned with improving the interpretability of network summaries in both a theoretical and an applied framework, with an application to clinically relevant problems in neuroscience. The theoretical part of this thesis is concerned with gra ...

EPFL2025

Cross-Net: Joint In-Line Holographic Image Reconstruction and Refocusing

Haitao Zhou

Holography enables quantitative phase sensing through light wave interference, allowing interesting imaging modalities applied in computational microscopy where phase shift is used as a way to generate image contrast. Recovering both amplitude and phase di ...

Springer Science and Business Media Deutschland GmbH2025

3D deep learning for enhanced atom probe tomography analysis of nanoscale microstructures

Ye Wei

Quantitative analysis of microstructural features on the nanoscale, including precipitates, local chemical orderings (LCOs) or structural defects (e.g. stacking faults) plays a pivotal role in understanding the mechanical and physical responses of engineer ...

2024

SuperAnimal pretrained pose estimation models for behavioral analysis

Alexander Mathis, Mackenzie Mathis, Shaokai Ye, Steffen Schneider, Jessy Lauer, Tian Qiu, Maxime Michel André Vidal, Anastasiia Filippova

Quantification of behavior is critical in diverse applications from neuroscience, veterinary medicine to animal conservation. A common key step for behavioral analysis is first extracting relevant keypoints on animals, known as pose estimation. However, re ...

Nature Research2024

3D fluorescence molecular tomography utilizing a novel SPAD camera

Edoardo Charbon, Claudio Bruschini, Arin Can Ülkü, Vikash Kumar Pandey

3D Fluorescence Molecular Tomography (FMT) is an important pre-clinical tool for quantifying and characterizing molecular markers for different diseases. Herein, we demonstrate, for the first time, 3D K-Space FMT reconstructions using a large time-gated SP ...

SPIE2024

Exploiting the diversity of modeling methods to probe systematic biases in strong lensing analyses

Aymeric Alexandre Galan

Challenges inherent to high-resolution and high signal-to-noise data as well as model degeneracies can cause systematic biases in analyses of strong lens systems. In the past decade, the number of lens modeling methods has significantly increased, from pur ...

EDP SCIENCES S A2024

Prompt-guided and multimodal landscape scenicness assessments with vision-language models

Devis Tuia

Recent advances in deep learning and Vision-Language Models (VLM) have enabled efficient transfer to downstream tasks even when limited labelled training data is available, as well as for text to be directly compared to image content. These properties of V ...

PUBLIC LIBRARY SCIENCE2024

Programming the scalable optical learning operator with spatial-spectral optimization

Demetri Psaltis, Christophe Moser, Niyazi Ulas Dinç, Ilker Oguz, Mustafa Yildirim, Carlo Gigli, Jih-Liang Hsieh, Yi Zhou Ju

Electronic computers have evolved drastically over the past years with an ever-growing demand for improved performance. However, the transfer of information from memory and high energy consumption have emerged as issues that require solutions. Optical tech ...

2024

Learning with Norm Constrained, Over-parameterized, Two-layer Neural Networks

Volkan Cevher, Fanghui Liu, Leello Tadesse Dadi

Recent studies show that a reproducing kernel Hilbert space (RKHS) is not a suitable space to model functions by neural networks as the curse of dimensionality (CoD) cannot be evaded when trying to approximate even a single ReLU neuron (Bach, 2017). In thi ...

2024

Intraday solar irradiance forecasting using public cameras

Demetri Psaltis, Mario Paolone, Christophe Moser, Luisa Lambertini, Ilker Oguz, Roy Sarkis

With the significant increase in photovoltaic (PV) electricity generation, more attention has been given to PV power forecasting. Indeed, accurate forecasting allows power grid operators to better schedule and dispatch their assets, such as energy storage ...

Pergamon-Elsevier Science Ltd2024

Distill-SODA: Distilling Self-Supervised Vision Transformer for Source-Free Open-Set Domain Adaptation in Computational Pathology

Jean-Philippe Thiran, Seyedbehzad Bozorgtabar, Guillaume Marc Georges Vray, Devavrat Tomar

Developing computational pathology models is essential for reducing manual tissue typing from whole slide images, transferring knowledge from the source domain to an unlabeled, shifted target domain, and identifying unseen categories. We propose a practica ...

Institute of Electrical and Electronics Engineers2024

Towards Robust Vision Models

Harshitha Machiraju

Deep convolutional neural networks (DCNNs) have significantly advanced the field of computer vision and are often considered as plausible models for the human visual system. However, they still have several vulnerabilities in terms of adversarial attacks, ...

EPFL2024

Online Learning of Continuous Signed Distance Fields Using Piecewise Polynomials

Ante Maric, Yiming Li, Sylvain Calinon

Reasoning about distance is indispensable for establishing or avoiding contact in manipulation tasks. To this end, we present an online approach for learning implicit representations of signed distance using piecewise polynomial basis functions. Starting f ...

Ieee-Inst Electrical Electronics Engineers Inc2024

How Close are Predictive Models to Teachers in Detecting Learners at Risk?

Tanja Christina Käser Jacober

Detecting learners in need of support is a complex process for both teachers and machines. Most prior work has devised visualization tools that allow teachers to do so by analyzing educational indicators. Other recent efforts have been devoted to models th ...

ASSOC COMPUTING MACHINERY2023

A Machine-Learning Architecture for Sensor Fault Detection, Isolation, and Accommodation in Digital Twins

Hossein Darvishi

Sensor technologies empower Industry 4.0 by enabling integration of in-field and real-time raw data into digital twins (DTs). However, sensors might be unreliable due to inherent issues and/or environmental conditions. This article aims at detecting anomal ...

2023