Lecture

Chemical Environments: Representations and Correlations

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In course

PHYS-754: Lecture series on scientific machine learning

This lecture presents ongoing work on how scientific questions can be tackled using machine learning. Machine learning enables extracting knowledge from data computationally and in an automatized way. We will learn on examples how this is influencing the v ...

Description

This lecture covers the representation of chemical environments using the Smooth Overlap of Atomic Positions (SOAP) kernel, which compares atomic densities based on relative positions of neighbors. It also discusses symmetrized density correlations and the use of tensor products to encode information. The lecture delves into the symmetries of atomic environments, the role of spherical harmonics, and the computation of invariant features. Additionally, it explores machine learning applications at the atomic scale, focusing on tensors and molecular polarizabilities.

Instructors (10)

Michele Ceriotti

Michele Ceriotti received his Ph.D. in Physics from ETH Zürich in 2010. He spent three years in Oxford as a Junior Research Fellow at Merton College. Since 2013 he leads the laboratory for Computational Science and Modeling in the Institute of Materials at EPFL. His research revolves around the atomic-scale modelling of materials, based on the sampling of quantum and thermal fluctuations and on the use of machine learning to predict and rationalize structure-property relations. He has been awarded the IBM Research Forschungspreis in 2010, the Volker Heine Young Investigator Award in 2013, an ERC Starting Grant in 2016, and the IUPAP C10 Young Scientist Prize in 2018.

David Richard Harvey

Expertise CosmologyDark MatterGalaxy ClustersStrong Gravitational LensingWeak Gravitational Lensing I am an observational and theoretical astrophysicist at EPFL. My main area of research is dark matter and trying to understand its properties and dynamics. I love to use deep learning in my work and understand how fondation models and generative AI can help us understand the Universe. I am a member of Euclid and ARRAKIHS and the lead of the self interacting dark matter Key Project in Euclid. Outside of my r

Matthieu Wyart

Teaching & PhD Past EPFL PhD Students Riccardo Ravasio, Mario Geiger, Wencheng Ji, Leonardo Petrini, Umberto Maria Tomasini, Alessandro Favero Courses Systèmes complexes PHYS-343 This courses show how known (entropy, phase transitions) and new (glasses, percolation, avalanche-type response) physical concepts can be used in various fields (including Computer science, neuroscience, social sciences).

Anne-Florence Raphaëlle Bitbol

I was trained in physics, and always had a strong interest in biology. I am broadly interested in understanding biological phenomena in a quantitative way, through physical concepts and mathematical and computational tools. I investigate the relative impacts of optimization and historical contingency in biological evolution, both at the scale of protein sequences and at the scale of microbial populations.Here is my research group website.Curriculum vitae Here is my complete CV. Professional experience:Since

Official source

Related concepts (32)

Tensor

In mathematics, a tensor is an algebraic object that describes a multilinear relationship between sets of algebraic objects related to a vector space. Tensors may map between different objects such as vectors, scalars, and even other tensors. There are many types of tensors, including scalars and vectors (which are the simplest tensors), dual vectors, multilinear maps between vector spaces, and even some operations such as the dot product.

Spherical harmonics

In mathematics and physical science, spherical harmonics are special functions defined on the surface of a sphere. They are often employed in solving partial differential equations in many scientific fields. Since the spherical harmonics form a complete set of orthogonal functions and thus an orthonormal basis, each function defined on the surface of a sphere can be written as a sum of these spherical harmonics. This is similar to periodic functions defined on a circle that can be expressed as a sum of circular functions (sines and cosines) via Fourier series.

Symmetric tensor

In mathematics, a symmetric tensor is a tensor that is invariant under a permutation of its vector arguments: for every permutation σ of the symbols {1, 2, ..., r}. Alternatively, a symmetric tensor of order r represented in coordinates as a quantity with r indices satisfies The space of symmetric tensors of order r on a finite-dimensional vector space V is naturally isomorphic to the dual of the space of homogeneous polynomials of degree r on V.

Spin-weighted spherical harmonics

In special functions, a topic in mathematics, spin-weighted spherical harmonics are generalizations of the standard spherical harmonics and—like the usual spherical harmonics—are functions on the sphere. Unlike ordinary spherical harmonics, the spin-weighted harmonics are U(1) gauge fields rather than scalar fields: mathematically, they take values in a complex line bundle. The spin-weighted harmonics are organized by degree l, just like ordinary spherical harmonics, but have an additional spin weight s that reflects the additional U(1) symmetry.

Tensor (intrinsic definition)

In mathematics, the modern component-free approach to the theory of a tensor views a tensor as an abstract object, expressing some definite type of multilinear concept. Their properties can be derived from their definitions, as linear maps or more generally; and the rules for manipulations of tensors arise as an extension of linear algebra to multilinear algebra. In differential geometry an intrinsic geometric statement may be described by a tensor field on a manifold, and then doesn't need to make reference to coordinates at all.

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