Publications associées à Supplementary datasets for the manuscript "Generative machine learning produces kinetic models that accurately characterize intracellular metabolic states" - Part 3

Publications associées (20)

Protein Kinase C Promotes Peroxisome Biogenesis and Peroxisome-endoplasmic Reticulum Interaction

Peroxisomes carry out a diverse set of metabolic functions, including oxidation of very long-chain fatty acids, degradation of D-amino acids and hydrogen peroxide, and bile acid production. Many of these functions are upregulated on demand; therefore, cell ...

ROCKEFELLER UNIV PRESS2025

Proteome adaptations of the organohalide-respiring Desulfitobacterium hafniense strain DCB-2 to various energy metabolisms

Christof Holliger, Julien Maillard, Florence Armand, Romain Hamelin, Mathilde Stéphanie Willemin

IntroductionDesulfitobacterium hafniense was isolated for its ability to use organohalogens as terminal electron acceptors via organohalide respiration (OHR). In contrast to obligate OHR bacteria, Desulfitobacterium spp. show a highly versatile energy meta ...

Frontiers Media SA2023

Seismic Testing of Adjacent Interacting Masonry Structures

Katrin Beyer, Igor Tomic

Masonry buildings form building aggregates around the world in historical centers, which developed as the layout of the city or village densified. In these aggregates, adjacent buildings can share structural walls, connected at the interfaces by interlocki ...

2023

Community-Aware Group Testing

Suhas Diggavi, Christina Fragouli, Pavlos Nikolopoulos

Group testing is a technique that can reduce the number of tests needed to identify infected members in a population, by pooling together multiple diagnostic samples. Despite the variety and importance of prior results, traditional work on group testing ha ...

IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC2023

Supplementary datasets for the manuscript "Generative machine learning produces kinetic models that accurately characterize intracellular metabolic states" -Part 2

Ljubisa Miskovic, Vassily Hatzimanikatis, Michaël Roger Germain Moret, David Michael Moret, Bharath Narayanan, Subham Choudhury

Supplementary files containing datasets needed to reproduce the results of the manuscript "Generative machine learning produces kinetic models that accurately characterize intracellular metabolic states" by S. Choudhury et al. The code to use with these da ...

Zenodo2023

Group testing for connected communities

Suhas Diggavi, Christina Fragouli, Pavlos Nikolopoulos

In this paper, we propose algorithms that leverage a known community structure to make group testing more efficient. We consider a population organized in disjoint communities: each individual participates in a community, and its infection probability depe ...

MICROTOME PUBLISHING2021

The COUGHVID crowdsourcing dataset: A corpus for the study of large-scale cough analysis algorithms

David Atienza Alonso, Lara Orlandic, Tomas Teijeiro Campo

Overview Cough audio signal classification has been successfully used to diagnose a variety of respiratory conditions, and there has been significant interest in leveraging Machine Learning (ML) to provide widespread COVID-19 screening. Th ...

Zenodo2021

Wannier90 as a community code: new features and applications

Nicola Marzari, Giovanni Pizzi, Marco Gibertini, Hyungjun Lee, Daniel John Gilles Marchand, Antimo Marrazzo, Samuel Poncé, Junfeng Qiao

Wannier90 is an open-source computer program for calculating maximally-localised Wannier functions (MLWFs) from a set of Bloch states. It is interfaced to many widely used electronic-structure codes thanks to its independence from the basis sets representi ...

2020

Optical microsystems for genetically engineered biosensors. Case study: Glucose monitoring

Bakul Jitendra Vinchhi

Diabetes is a global epidemic with millions of people dying from it every year. Progress in microelectronics and machine learning has led to a huge number of FDA approvals of devices for continuous monitoring and treatment of diabetes with one product usin ...

EPFL2019

Transition Metal Oxides as Electrocatalysts for the Oxygen Evolution Reaction in Alkaline Solutions: An Application-Inspired Renaissance

Xile Hu, Laurent Liardet, Fang Song, Aliki Moysiadou, Lichen Bai, Seunghwa Lee

Water splitting is the essential chemical reaction to enable the storage of intermittent energies such as solar and wind in the form of hydrogen fuel. The oxygen evolution reaction (OER) is often considered as the bottleneck in water splitting. Though meta ...

2018

Tests on Thin Reinforced Concrete Walls Subjected to In-plane and Out-of-plane Cyclic Loading

Katrin Beyer, João Saraiva Esteves Pacheco de Almeida, Angelica Rosso

The present data paper describes an experimental campaign on five thin T-shaped reinforced concrete walls, including: details on the test units, materials, test setup, loading protocol, instrumentation, main features of each unit's response, organization o ...

2017

Agile text mining with Sherlok

Jean-Cédric Chappelier, Sean Lewis Hill, Renaud Luc Richardet

The successful development of an intelligent text mining application requires the collaboration of two main stakeholders: subject matter experts and text miners. In this paper, we describe a new methodology, agile text mining to improve that collaboration. ...

IEEE2015

Overview of the IFMIF test facility design in IFMIF/EVEDA phase

The test facility (TF) is one of the three major facilities of the International Fusion Material Irradiation Facility (IFMIF). Engineering designs of TF main systems and key components have been initiated and developed in the IFMIF EVEDA (Engineering Valid ...

Elsevier Science Sa2015

Methodology for Identification of Suitable ORC-Cycle and Working-Fluid using Integration with Multiple Objectives

Daniel Favrat, François Maréchal, Matthias Bendig

In recent times the interest in electricity production with Organic Rankine Cycles (ORC) has increased. A look into recent publications shows that the identification of suitable working fluids is in general done by a look at a more or less small number of ...

Aidic Servizi Srl2014

Design and Strand Tests of a Fusion Cable Composed of Coated Conductor Tapes

Rainer Wesche, Pierluigi Bruzzone, Davide Uglietti

The design of a flat cable suitable for future fusion reactors has been carried out. The cable consists of twisted round strands, which are composed of tapes stacked between copper profiles. According to calculations, the strand twist pitch and the cable t ...

IEEE Institute of Electrical and Electronics Engineers2014

Recent Tests of the ITER Conductors and Highlights in Nb3Sn Conductors Behavior

Rainer Wesche, Pierluigi Bruzzone, Boris Stepanov, Kamil Sedlák

The tests of the ITER Toroidal Field (TF) full length conductors (hundreds of meters, production phase IN) were started at the end of year 2012 and were performed accordingly to the firmly specified test program. The TF conductors produced by the ITER dome ...

IEEE Institute of Electrical and Electronics Engineers2014

A SOFT Way for OpenFlow Switch Interoperability Testing

Dejan Kostic, Marco Canini, Maciej Leszek Kuzniar, Peter Peresini

The increasing adoption of Software Defined Networking, and OpenFlow in particular, brings great hope for increasing extensibility and lowering costs of deploying new network functionality. A key component in these networks is the OpenFlow agent, a piece o ...

2012

Sequential Group Testing with Graph Constraints

Amin Karbasi, Morteza Zadimoghaddam

In conventional group testing, the goal is to detect a small subset of defecting items

\mathcal{D}

in a large population

\mathcal{N}

by grouping \textit{arbitrary} subset of

\mathcal{N}

into different pools. The result of each group test $\mathcal{T} ...

Ieee2012

First experimental results from the European Union 2 MW coaxial cavity ITER gyrotron prototype

Stefano Alberti, Damien Fasel, Timothy Goodman, Pierre Lavanchy, Blaise Marlétaz, Philippe Marmillod, Albert Perez, Minh Quang Tran, Jean-Philippe Hogge, Ugo Siravo, Laurie Porte, Emmanuel Droz, Ioannis Pagonakis

The European Union is working toward providing 2-MW, coaxial-cavity, continuous-wave (cw) 170-GHz gyrotrons for ITER. Their design is based on results,from an experimental preprototype tube having a pulse length of several milliseconds, in operation at For ...

American Nuclear Society2009

PathScore-Relevance: A Metric for Improving Test Quality

George Candea, Silviu Andrica

Reliability of today's software systems hinges on developers writing test cases that exercise as much of a program as possible. Writing and running such tests is inevitably subject to a time budget. This paper addresses the question of how to maximize qual ...

2009