John McKinneyProfessor John McKinney received his Ph.D. from The Rockefeller University (New York, NY) in 1994 for studies on cell cycle regulation in
Saccharomyces cerevisiae
in the laboratory of Fred Cross. From 1995 to 1998, he was a postdoctoral fellow in the laboratory of William Jacobs at the Albert Einstein College of Medicine (Bronx, NY), where he studied mechanisms of persistence in
Mycobacterium tuberculosis
. In 1999, he returned to Rockefeller University to establish his own laboratory as an Assistant (1999-2004) and then Associate (2004-2007) Professor. In July 2007, the lab relocated to the Global Health Institute in the School of Life Sciences at the École Polytechnique Fédérale de Lausanne (EPFL) in Switzerland, where McKinney is Professor and Head of the Laboratory of Microbiology and Microsystems (LMIC). Our research focuses on understanding the mechanistic basis of bacterial persistence in the context of host immunity and antimicrobial therapy, using
M. tuberculosis
as a "model" system.
Freddy RadtkeEnseignement et PhD Doctorant·es actuel·les Elia Escoffier A dirigé les thèses EPFL de Didier Surdez, Konstantin Shakhbazov, Agnieszka Anna Wendorff, April Bezdek Pomey, Rajwinder Lehal, Caroline Poisson, Luca Pellegrinet, Silvia Wirth, Fabian Junker, Monique Coersmeyer, Viktoria Reinmüller, Chhavi Jain, Delphine Tardivon, Grégory La Sala, Mateusz Waldemar Antoszewski, Linlin Cao, Amber Dawn Bowler, Morgane Fournier, Anita Bodac A co-dirigé les thèses EPFL de Bhushan Sarode, Marzia Armaro, Charlotte Urech
Jacques RougemontEnseignement et PhD A co-dirigé les thèses EPFL de Swapna Uplekar, Irina Krier, Alexis Rapin, Aline Sondra Adler, Teresa Didonna Cours Genomics and bioinformatics BIO-463 Ce cours introduit différentes méthodes d'analyse de données issues du séquencage d'ADN, de l'assemblage de génomes à l'analyse quantitative de l'évolution et de l'expression des gènes, à la liaison des facteurs de transcription et à la conformation des chromosomes.
Pierre RossiExpertise
Molecular tools (from DNA/RNA extractions procedures to complex community analysis) dedicated to microbial ecology Bioremediation of contaminated habitatsBiorecycling of valuable and critical metals for electronic waste and bottom ashesMultivariate statistics and numerical ecology applied to the microbial ecology field (soils, bioreactors, etc)Water desinfection proceduresGroundwater tracing with bacteriophagesCharacterization of bacterial strains contaminating industrial processes and medical env
Françoise Gisou van der Goot GrunbergGisou van der Goot est responsable du Laboratoire de Biologie Cellulaire et Membranaire et co-fondatrice de l'Institut dInfectiologie, à la Faculté des Sciences de la Vie de l'EPFL.Depuis 2021, Prof. van der Goot est Vice-présidente pour la transformation responsable, moteur du changement de l’EPFL vers une culture inclusive et un campus durable. De 2014 à 2020, Prof. van der Goot a occupé la fonction de Doyenne de cette même Faculté.Avant sa nomination à l'EPFL, en 2006, elle était Cheffe de Groupe à la Faculté des Sciences de lUniversité de Genève (UNIGE), puis Professeure Associée à la Faculté de Médecine. Prof. van der Goot a d'abord obtenu un diplôme dIngénieur de l'Ecole Centrale de Paris avant dentamer une thèse en Biophysique Moléculaire au CEA de Saclay (Université de Paris VI), suivie dun séjour postdoctoral au Laboratoire Européen de Biologie Moléculaire (EMBL) à Heidelberg (Allemagne). Différentes distinctions lui ont été décernées, dont, en 2001, le Prix Young Investigator de l'EMBO (Organisation européenne de Biologie Moléculaire), puis, en 2005, le soutien par le programme international du Howard Hughes Medical Institute (HHMI, Etats-Unis); en 2009, elle a été la première femme à obtenir le Prix Marcel Benoist. La même année, elle est élue membre de lEMBO. Les domaines dexpertise du Prof. van der Goot incluent les mécanismes moléculaires et cellulaires des toxines bactériennes, l'organisation des membranes (des mammifères) et la biologie des organelles. Prof. van der Goot est membre du conseil scientifique de diverses organisations telles que le Fonds National Suisse de la Recherche Scientifique (SNF), le Conseil Suisse de la Science et de la Technologie (CSST) et le Conseil Européen de la Recherche (ERC).
Felix SchürmannFelix Schürmann is co-director of the Blue Brain Project and involved in several research challenges of the European Human Brain Project. He studied physics at the University of Heidelberg, Germany, supported by the German National Academic Foundation. Later, as a Fulbright Scholar, he obtained his Master's degree (M.S.) in Physics from the State University of New York, Buffalo, USA, under the supervision of Richard Gonsalves. During these studies, he became curious about the role of different computing substrates and dedicated his master thesis to the simulation of quantum computing. He studied for his Ph.D. at the University of Heidelberg, Germany, under the supervision of Karlheinz Meier. For his thesis he co-designed an efficient implementation of a neural network in hardware.
Bernard MoretBernard M.E. Moret was born in Vevey, Switzerland, received baccalauréats in Latin-Greek and Latin-Mathematics, then did a Diploma in Electrical Engineering at EPFL. After working for 2 years for Omega and Swiss Timing on the development of real-time OS for sports applications, he left for the US. He received his PhD in Electrical Engineering from the U. of Tennessee in 1980 and joined the Department of Computer Science at the University of New Mexico (UNM) that fall. He served as Chairman of the department from 1991 till 1993 and eventually retired in summer 2006 to join the School of Computer and Communication Sciences at EPFL. (You can read about his work at UNM on his (archived) personal and laboratory web pages at UNM.) He was appointed group leader for phylogenetics at the Swiss Institute for Bioinformatics (SIB). From 2009 until his retirement, he was also in charge of the BS and MS programs in Computer Science and Associate Dean for Education. He founded the ACM Journal of Experimental Algorithmics (JEA) and served as its Editor-in-Chief for 7 years; he also helped found the IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB), where he served as Associate Editor until 2008. He founded the annual Workshop on Algorithms in Bioinformatics (WABI) and chairs its steering committee, and he serves on the steering committee of the Workshop on Algorithm Engineering and Experiments (ALENEX). Until summer 2008, he chaired the Biodata Management and Analysis (BDMA) study section of the US National Institutes of Health (NIH); now he is a charter member of the NIH College of Reviewers. He led a team of over 50 biologists, computer scientists, and mathematicians in the CIPRES (Cyber Infrastructure for Phylogenetic Research) project, funded by the US National Science Foundation (NSF) for US$ 12 million over 5 years. He has published nearly 150 papers in computational biology, under funding from the US NSF, the Alfred P. Sloan foundation, the IBM Corporation, the US NIH, the Swiss NSF, and SystemsX.ch. He is a Fellow of the ISCB (International Society for Computational Biology). His Erdös number is 2 and (as of 2020) his h-index is 48.
Jörg HülskenProf. Joerg Huelsken received his PhD in 1998 at the Humboldt University and did postdoctoral research in the laboratory of Walter Birchmeier at the Max-Delbrueck Center for Molecular Medicine, Berlin. He joined ISREC as an associate scientist and an NCCR project leader in January 2003 and, in 2005, was nominated Tenure Track Assistant Professor at the EPFL School of Life Sciences.
