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Stéphane Joost

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Publications associées (126)

Spatial distribution of mammography adherence in a Swiss urban population and its association with socioeconomic status

Stéphane Joost, Rebecca Himsl, Idris Guessous

Purpose: Local physical and social environment has a defining influence on individual behaviour and health-related outcomes. However, it remains undetermined if its impact is independent of individual socioeconomic status. In this study, we evaluated the s ...

2018

The Least Cost Path From Landscape Genetics to Landscape Genomics: Challenges and Opportunities to Explore NGS Data in a Spatially Explicit Context

Stéphane Joost

Ecosystems are the stage on which the play of evolution is acted. Inferring evolutionary processes from the spatial and temporal genetic patterns they produce in populations is challenging because ecosystems are highly complex, spatially structured, and te ...

2018

Combining Landscape Genomics and Ecological Modelling to Investigate Local Adaptation of Indigenous Ugandan Cattle to East Coast Fever

Stéphane Joost, Estelle Rochat, Elia Vajana

East Coast fever (ECF) is a fatal sickness affecting cattle populations of eastern, central, and southern Africa. The disease is transmitted by the tick Rhipicephalus appendiculatus, and caused by the protozoan Theileria parva parva, which invades host lym ...

2018

Public smoking ban and socioeconomic inequalities in smoking prevalence and cessation: a cross-sectional population-based study in Geneva, Switzerland (1995–2014)

Stéphane Joost, Idris Guessous

Introduction Smoking bans were suggested to reduce smoking prevalence and increase quit ratio but their equity impact remains unclear. We aimed to characterise the socioeconomic status (SES)-related inequalities in smoking prevalence and quit ratio before ...

2018

The impact of a public smoking ban on smoking socioeconomic inequalities in a Swiss urban population

Stéphane Joost, Idris Guessous

OXFORD UNIV PRESS2018

AdaptMap: exploring goat diversity and adaptation

Stéphane Joost

BMC2018

Genome-wide SNP profiling of worldwide goat populations reveals strong partitioning of diversity and highlights post-domestication migration routes

Stéphane Joost, Estelle Rochat, Elia Vajana

Background: Goat populations that are characterized within the AdaptMap project cover a large part of the worldwide distribution of this species and provide the opportunity to assess their diversity at a global scale. We analysed genome-wide 50K single nuc ...

BMC2018

Combining landscape genomics and ecological modelling to investigate local adaptation of indigenous Ugandan cattle to East Coast fever

Stéphane Joost, Estelle Rochat, Elia Vajana

2018

Spatial clusters of daytime sleepiness and association with nighttime noise levels in a Swiss general population (GeoHypnoLaus)

Stéphane Joost, Rebecca Himsl, Idris Guessous

INTRODUCTION: Daytime sleepiness is highly prevalent in the general adult population and has been linked to an increased risk of workplace and vehicle accidents, lower professional performance and poorer health. Despite the established relationship between ...

2018

Simple rules for an efficient use of Geographic Information Systems in molecular ecology

Stéphane Joost, Estelle Rochat, Solange Catherine Gaillard, Kevin Leempoel, Ivo Widmer

Geographic Information Systems (GIS) are becoming increasingly popular in the context of molecular ecology and conservation biology thanks to their display options efficiency, flexibility and management of geodata. Indeed, spatial data for wildlife and liv ...

2017

Persistence of butterfly populations in fragmented habitats along urban density gradients: motility helps

Stéphane Joost, Estelle Rochat, Ivo Widmer

In a simulation study of genotypes conducted over 100 generations for more than 1600 butterfly’s individuals, we evaluate how the increase of anthropogenic fragmentation and reduction of habitat size along urbanisation gradients (from 7% to 59% of impervio ...

Nature Publishing Group2017

Landscape genomic approach to detect selection signatures in locally adapted Brazilian swine genetic groups

Stéphane Joost, Robson Jose Cesconeto

Samples of 191 animals from 18 different Brazilian locally adapted swine genetic groups were genotyped using Illumina Porcine SNP60 BeadChip in order to identify selection signatures related to the monthly variation of Brazilian environmental variables. Us ...

2017

High performance computation of landscape genomic models including local indicators of spatial association

Stéphane Joost, Sylvie Stucki, Pierre Taberlet, Solange Catherine Gaillard

With the increasing availability of both molecular and topo-climatic data, the main challenges facing landscape genomics — i.e. the combination of landscape ecology with population genomics — include processing large numbers of models and distinguishing be ...

Wiley-Blackwell2017

Spatial dependence of genetic data related to human health and livestock disease resistance: a role for geography to support the One Health approach

Stéphane Joost

The spatial dependence of located health and/or genetic data can be used to detect clusters likely to reveal disease prevalence or signatures of adaptation associated with characteristics of the local environment (high temperatures, air or water pollution) ...

2017

Detecting animals in African Savanna with UAVs and the crowds

Stéphane Joost, Devis Tuia

Unmanned aerial vehicles (UAVs) offer new opportunities for wildlife monitoring, with several advantages over traditional field-based methods. They have readily been used to count birds, marine mammals and large herbivores in different environments, tasks ...

Elsevier2017

Spatial clustering for district heating integration in urban energy systems: application to geothermal energy

François Maréchal, Stéphane Joost, Jérémy Michel Pierre Unternährer, Stefano Moret

Given the challenges related to climate change and dependency from fossil fuels, modification of the energy systems infrastructure to increase the share of renewable energy is a priority in urban energy planning. The high heating density in cities makes it ...

2017

A WebGIS platform for the monitoring of Farm Animal Genetic Resources (GENMON)

Stéphane Joost, Giona Matasci, Solange Catherine Gaillard, Ivo Widmer

Background In 2007, the Food and Agriculture Organization of the United Nations (FAO) initiated the Global plan of action for Farm Animal Genetic Resources (FAnGR). The main goal of this plan is to reduce further loss of genetic diversity in farm animals, ...

Public Library of Science2017

Combining genotype, phenotype and environment to infer potential candidate genes: An example using the Loblolly pine (Pinus taeda)

Stéphane Joost

Population genomic analyses can be an important tool in understanding local adaptation. Identification of potential adaptive loci in such analyses is usually based on the survey of a large genomic dataset in combination with environmental variables. Phenot ...

Oxford University Press2017

Persistent spatial clusters of high body mass index in a Swiss urban population as revealed by the 5-year GeoCoLaus longitudinal study

Joël Chételat, Stéphane Joost, Solange Catherine Gaillard, Fred Michel Paccaud, Murielle Bochud, Idris Guessous

OBJECTIVE Body mass index (BMI) may cluster in space among adults and be spatially dependent. Whether and how BMI clusters evolve over time in a population is currently unknown. We aimed to determine the spatial dependence of BMI and its 5-year evolution i ...

Bmj Publishing Group2016

Combining Human Computing and Machine Learning to Make Sense of Big (Aerial) Data for Disaster Response

Stéphane Joost, Devis Tuia, Patrick Meier, Matthew Josef Parkan, Julien Briant, Muhammad Imran, Carlos Castillo

Aerial imagery captured via unmanned aerial vehicles (UAVs) is playing an increasingly important role in disaster response. Unlike satellite imagery, aerial imagery can be captured and processed within hours rather than days. In addition, the spatial resol ...

Mary Ann Liebert, Inc2016

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