Publication

Efficient String Matching Algorithms for Combinatorial Universal Denoising

2005
Conference Papers

Abstract

Inspired by the combinatorial denoising method {\tt DUDE} \cite{WOSVW04}, we present efficient algorithms for implementing this idea for arbitrary contexts or for using it within subsequences. We also propose effective, efficient denoising error estimators so we can find the best denoising of an input sequence over different context lengths. Our methods are simple, drawing from string matching methods and radix sorting. We also present experimental results of our proposed algorithms.

Official source

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2005
Conference Papers

Abstract

Official source

Related concepts (32)

Context-free language

In formal language theory, a context-free language (CFL) is a language generated by a context-free grammar (CFG). Context-free languages have many applications in programming languages, in particular, most arithmetic expressions are generated by context-free grammars. Different context-free grammars can generate the same context-free language. Intrinsic properties of the language can be distinguished from extrinsic properties of a particular grammar by comparing multiple grammars that describe the language.

Context-sensitive grammar

A context-sensitive grammar (CSG) is a formal grammar in which the left-hand sides and right-hand sides of any production rules may be surrounded by a context of terminal and nonterminal symbols. Context-sensitive grammars are more general than context-free grammars, in the sense that there are languages that can be described by a CSG but not by a context-free grammar. Context-sensitive grammars are less general (in the same sense) than unrestricted grammars.

Radix sort

In computer science, radix sort is a non-comparative sorting algorithm. It avoids comparison by creating and distributing elements into buckets according to their radix. For elements with more than one significant digit, this bucketing process is repeated for each digit, while preserving the ordering of the prior step, until all digits have been considered. For this reason, radix sort has also been called bucket sort and digital sort. Radix sort can be applied to data that can be sorted lexicographically, be they integers, words, punch cards, playing cards, or the mail.

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