Fosco Bernasconi2014-Present:
post-doc at the EPFL, Laboratory of Congitive Neuroscience.
2012-2014:
Postdoctoral Research Associate, Charité University Medicine, Berlin, Germany.
2012:
Postdoctoral Research Associate,Psychiatric University Hospital (PUK), Zurich, Switzerland.
2008-2011:
PhD in Neurosciences,Lemanic Neurosciences Doctoral School, Faculty of Biology and Medicine, Lausanne University, Switzerland.
2007-2008:
Master in Medical Biology,Faculty of Biology & Medicine, Lausanne University,Switzerland.
Johanni Michael BreaTeaching & PhD PhD Students Aude Maier, Lucas Louis Gruaz, Flavio Martinelli Courses Artificial intelligence and society HUM-286 This course integrates social sciences and humanities with engineering sciences, and introduces students to the social, technical and political issues surrounding artificial intelligence. Biological data science II : machine learning BIO-322 Students understand basic concepts and methods of machine learning. They can describe them in mathematical
Amaury Pierre Jiezhi WeiExpertise
Deep Learning, Computer Vision, Physics Informed Machine Learning, Graph Neural Networks
Amaury obtained his Master's degree in Robotics from the Federal Institute of Technology in Lausanne (EPFL) in 2021.Before joining IMOS, he worked for multiple years at Logitech Europe S.A. as a Software Engineer in the field of Augmented and Virtual Reality. He researched 6DoF tracking solutions for handheld devices, developed the firmware and designed the testing strategy for the MR Stylus MX Ink.During his
Bruno Emanuel Ferreira De Sousa CorreiaThroughout my PhD and postdoctoral studies I was trained in world-renowned laboratories and institutions in the United States of America (University of Washington and The Scripps Research Institute). Very early in my scientific career I found out my fascination about protein structure and function. My PhD studies evolved in the direction of immunogen design and vaccine engineering which sparked my interest in the many needs and opportunities in vaccinology and translational research. My efforts resulted in an enlightening piece of work where for the first time, computationally designed immunogens elicited potent neutralizing antibodies. During my postdoctoral studies I joined a chemical biology laboratory at the Scripps Research Institute. In this stage I developed novel chemoproteomics methods for the identification of protein-small molecule interaction sites in complex proteomes. In March 2015, I joined the École Polytechnique Fédérale de Lausanne (EPFL) – Switzerland as a tenure track assistant professor. The focus of my research group is to develop computational tools for protein design with particular emphasis in applying these strategies to immunoengineering (e.g. vaccine and cancer immunotherapy). The activities in my laboratory focus on computational design methods development and experimental characterization of the designed proteins. Our laboratory has been awarded with 2 prestigious research grants from the European Research Council. Lastly, I have been awarded the prize for best teacher of Life sciences in 2019.
André AnjosExpertise
Reproducible ResearchPattern RecognitionImage ProcessingMachine LearningBiometrics
Short bio
André Anjos received his Ph.D. degree in signal processing in 2006 studying the application of neural nets and statistical methods for particle recognition in the context of High-Energy Physics experiments at Large Hadron Collider at CERN, Switzerland. He joined the Idiap Research Institute in 2010 where he works with biosignal processing and biometrics applications. He currently heads the Biosignal Proces
James Richard LarusExpertise
James Larus is a Professor Emeritus and former Dean of the School of Computer and Communication Sciences (IC) at EPFL (école Polytechnique Fédérale de Lausanne). Before joining IC in October 2013, Larus was a researcher, manager, and director in Microsoft Research for over 16 years and an Assistant and Associate Professor in the Computer Sciences Department at the University of Wisconsin, Madison.Larus has been an active contributor to numerous communities. He published over 100 papers (with 14 be
Katia GalanExpertise
Histology, genomics, cosec and BSO
Maud EhrmannMaud Ehrmann is a research scientist at EPFL’s Digital Humanities Laboratory lead by Prof.
Frédéric Kaplan
. She holds a PhD in Computational Linguistics from the Paris Diderot Universtiy (Paris 7) and has been engaged in a large number of scientific projects centred on information extraction and text analysis, both for present-time and historical documents. Her main research interests span Natural Language Processing and Digital Humanities and include, among others, historical text annotation, historical data processing and representation, named entity recognition, and multilingual linguistic resources creation.
Her current work at the DHLAB focuses on
‘impresso - Media Monitoring of the Past’
, a SNF sinergia project she initiated with
Marten Düring
(
C2DH
) and
Simon Clematide
(
ICL
) and which aims at enabling critical analysis of historical newspapers. In addition to the overall project management, her contributions to this project include system design and data management, annotation and benchmarking and named entity processing. Besides, she participates to the activities of the
Venice Time Machine
, working particularly on information extraction and knowledge representation tasks. Previously, she worked on the
Garzoni
project where she supervised and contributed to the development of a web-based transcription and annotation interface - in collaboration with Orlin Topalov, and built a linked data-based historical knowledge base. She also contributed to the
Le Temps Digital Archives project
.
Prior to joining the DHLAB, she worked at the
Linguistics Computing Laboratory
at the Sapienza University of Rome with Roberto Navigli, where she worked on the
BabelNet
resource - a very large multilingual encyclopaedic dictionary and semantic network - and contributed to the
LIDER
project. Before that, she has been working for four years at the European Commission’s Joint Research Centre in Ispra, Italy, as member of the OPTIMA unit (now
Text and Data mining
unit), which develops innovative and application-oriented solutions for retrieving and extracting information from the Internet with a focus on high multilinguality. Together with Erik van der Goot,
Ralf Steinberger
, Hristo Tanev, Leo della Rocca and many others, she contributed to the development of the
Europe Media Monitor
(EMM). Prior, she worked at the Xerox Europe Research Centre in Grenoble, France (now
Naver Labs Europe
) in the Parsing & Semantics group led by Frédérique Segond, first as PhD candidate supported through a CIFRE grant under the supervision of
Caroline Brun
and
Bernard Victorri
, then as a post-doctoral researcher. There her research focused mainly on the automatic processing and fine-grained analysis of entities of interest, specifically named entities and temporal expressions.
Andrea AblasserTeaching & PhD PhD Students Ekaterina Gorbacheva, Iris Arianna Dorschel, Tieliang Gan, Yu Meng Past EPFL PhD Students Simone Margret Haag, Sélène Glück, Marilena Wischnewski, Sophie Rivara, Natasha Samson Courses Immunology - advances and therapeutic implications BIO-479 The students acquire advanced level knowledge regarding the functioning of the (vertebrate) immune system. A strong focus is placed on the molecular mechanisms underlying innate and adaptive immune responses and their impl
Hannes Markus PeterCurrent work
I am a microbial ecologist and mainly interested in factors shaping bacterial communities and functioning in freshwater ecosystems. I use combinations of field observations, experiments and molecular techniques to test hypotheses regarding the assembly of microbial communities, the influence of environmental variability and relationships between diversity and funcioning. I enjoy working in alpine environments, which are sensitive to climate change and represent excellent model systems.
Teaching
Maria Giulia PretiMaria Giulia Preti received her Ph.D. in Bioengineering at Politecnico di Milano (Milan, Italy) in 2013, after her M. Sc. (2009) and B. Sc. (2007) in Biomedical Engineering, as well at Politecnico di Milano. During her Ph.D., mentored by Prof. Giuseppe Baselli, she focused on advanced techniques of brain magnetic resonance imaging, in particular she developed a method of groupwise fMRI-guided tractography, that revealed to be useful in the in-vivo investigation of the pathophysiological changes across the evolution of Alzheimers disease. For this project, she had been collaborating full-time with the hospital Fondazione Don Gnocchi in Milan (Magnetic Resonance Laboratory). In 2011, she was awarded a Progetto Rocca fellowship from MIT-Italy and spent a visiting research period at the MIT and Harvard Medical School (Boston, USA), under the supervision of Prof. Nikos Makris, where she could focus on the anatomical study of specific neruonal bundles.
She has joined Prof. Van De Ville group at EPFL as a post-doc in 2013. Her current research aims at understanding the connections between brain functionality and brain microscopic anatomy by using advanced techniques of Magnetic Resonance Imaging. In particular, she is working on functional MRI, functional connectivity, diffusion tensor imaging and tractography, integration of MRI with other techniques (e.g. EEG), and the application of these methods to several clinical contexts, e.g., epilepsy, Alzheimer's disease and mild cognitive impairment, multiple sclerosis, attention deficit hyperactivity disorder.
Diego GhezziProf. Diego Ghezzi holds the Medtronic Chair in Neuroengineering at the School of Engineering at the Ecole Polytechnique Fédérale de Lausanne. He received his M.Sc. in Biomedical Engineering (2004) and Ph.D. in Bioengineering (2008) from Politecnico di Milano. From 2008 to 2013, he completed his postdoctoral training at Istituto Italiano di Tecnologia in Genova at the Department of Neuroscience and Brain Technologies; where he was promoted to Researcher in 2013. In 2015, he was appointed as Tenure-Track Assistant Professor of Bioengineering at the EPFL Center for Neuroprosthetics and Institute of Bioengineering.
