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Lecture

Singularity Container Setup for Jupyter Notebook

Description

This lecture covers the setup of a Singularity container to run a Jupyter notebook, including SSH connections, software announcements, usage statistics, and system maintenance. It demonstrates building the container, installing packages, and running Jupyter in the container.

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Related concepts (32)

Singularity (mathematics)

In mathematics, a singularity is a point at which a given mathematical object is not defined, or a point where the mathematical object ceases to be well-behaved in some particular way, such as by lacking differentiability or analyticity. For example, the function has a singularity at , where the value of the function is not defined, as involving a division by zero. The absolute value function also has a singularity at , since it is not differentiable there. The algebraic curve defined by in the coordinate system has a singularity (called a cusp) at .

Notebook interface

A notebook interface or computational notebook is a virtual notebook environment used for literate programming, a method of writing computer programs. Some notebooks are WYSIWYG environments including executable calculations embedded in formatted documents; others separate calculations and text into separate sections. Notebooks share some goals and features with spreadsheets and word processors but go beyond their limited data models. Modular notebooks may connect to a variety of computational back ends, called "kernels".

Project Jupyter

Project Jupyter (ˈdʒuːpɪtər) is a project to develop open-source software, open standards, and services for interactive computing across multiple programming languages. It was spun off from IPython in 2014 by Fernando Pérez and Brian Granger. Project Jupyter's name is a reference to the three core programming languages supported by Jupyter, which are Julia, Python and R. Its name and logo are an homage to Galileo's discovery of the moons of Jupiter, as documented in notebooks attributed to Galileo.

Singularity theory

In mathematics, singularity theory studies spaces that are almost manifolds, but not quite. A string can serve as an example of a one-dimensional manifold, if one neglects its thickness. A singularity can be made by balling it up, dropping it on the floor, and flattening it. In some places the flat string will cross itself in an approximate "X" shape. The points on the floor where it does this are one kind of singularity, the double point: one bit of the floor corresponds to more than one bit of string.

Package manager

A package manager or package-management system is a collection of software tools that automates the process of installing, upgrading, configuring, and removing computer programs for a computer in a consistent manner. A package manager deals with packages, distributions of software and data in s. Packages contain metadata, such as the software's name, description of its purpose, version number, vendor, checksum (preferably a cryptographic hash function), and a list of dependencies necessary for the software to run properly.

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