Benoît CrouzyTeaching & PhD Past EPFL PhD Students as codirector Sophie Erb Courses Environmental transport phenomena ENG-420 The course aims at introducing basic physical aspects of molecular and turbulent diffusion, as well as of dispersion processes, their mathematical modeling, solutions and related environmental applications
Nicolas ThomäTeaching & PhD PhD Students David Domjan, Pierre Alexander Miranda Herrera, Laurin Tim Kanis, Alessandro Minafra, Pau Reolid Coll Courses Practical - Thomä Lab BIO-624 Expression and purification of recombinant proteins are key methods in our lab studying protein machines on a structural level and ways in which they can be reprogrammed by small molecules. In the course, we will express and purify proteins and biophysically characterise them. Trends in chemical biology and drug discovery
Anne-Florence Raphaëlle BitbolI was trained in physics, and always had a strong interest in biology. I am broadly interested in understanding biological phenomena in a quantitative way, through physical concepts and mathematical and computational tools. I investigate the relative impacts of optimization and historical contingency in biological evolution, both at the scale of protein sequences and at the scale of microbial populations.Here is my research group website.Curriculum vitae Here is my complete CV. Professional experience:Since
Milena Maria SchuhmacherResearchSchuhmacher Lab & Chemical and Membrane Biology It's all about the lipids: In the Schuhmacher Lab we are interested in answering outstanding questions in membrane biology. Our chemical biology approach opens the door to investigate the so far mostly invisible and thus secret work of lipids. In particular, we would like to understand the biological role of lipid diversity and their impact on signaling processes.
Teaching & PhD PhD Students Mélissa Ruiz, Gary Domeniconi, Linda Wedemann Courses
Rolf GruetterAwards:
1999 Young Investigator Award Plenary Lectureship
, International Society for Neurochemistry
2011 Fellow
, ESMRMB
2011 Teaching Award
, Section Sciences de la Vie, EPFL
Barbora HudcováTeaching & PhD Courses Cellular automata and models of artificial life MATH-527 In this class, we will study artificial life, i.e. mathematical models that aim to capture key processes underlying life, in particular replication, emergence of complexity, and evolution.
Nikolaos StergiopoulosEducation
MTE, Managing the Technology Enterprise Program (2000), IMD, Lausanne
Ph.D. in Biomedical Engineering & Engineering Mechanics (1990) Iowa State University, Ames, Iowa.
MS in Biomedical Engineering (1987) Iowa State University, Ames, Iowa.
Diploma in Mechanical Engineering (1985) National Technical University of Athens.
Professional Activities
2002 - present: Professor and director of LHTC
2010 - present: Founder and director of Rheon Medical SA, Préverenges, Switzerland
2008 - present: Founder and director of Antlia S.A., PSE-C, EPFL campus, Switzerland
1998 - 2007: Founder and Scientific Director of EndoArt S.A., Lausanne, Switzerland
1996 - 2002: Assistant professor at the Biomedical Engineering Laboratory, Swiss Federal Institute of Technology, Lausanne, Switzerland.
1991 - 1996: Research Associate at Swiss Federal Institute of Technology - Lausanne
1990 - 1991: Lecturer, Iowa State University
Prabhu Prasad SwainEducation Integrated M.Sc. (5 year) | Physics (majors)Chemistry, Biology, Mathematics and Electronics (minors) 2015 – 2020 UM-DAE Centre for Excellence in Basic Sciences, Mumbai
Annalisa BuffaTeaching & PhD PhD Students Gonzalo Bonilla Moreno, Philipp Christoph Weder, Yannis Dirk Voet, Fabio Marcinno, Ferhat Sindy, Francesco Sala, Markus Renoldner, Mohamed Ben Abdelouahab, Davor Dobrota Past EPFL PhD Students Luca Coradello, Ondine Chanon, Riccardo Puppi Courses Numerical approximation of PDEs MATH-451 The course is about the derivation, theoretical analysis and implementation of the finite element method for the numerical approximation of partial differential equations in on
Christian SachseTeaching & PhD Courses Philosophie des sciences de la vie II HUM-430 Evaluate the main positions in a chosen philosophical debate. Develop in your group a solid approach to one or more philosophical problems of that debate. Defend your analysis and conclusions. Philosophy of biology HUM-216 Identify and understand central issues in the philosophy of biology, notably about biological evolution and the emergence of life. Evaluate and compare crucial arguments in the debates. Sy
Théodore BessonExpertise
Sustainable DevelopmentEnvironmental ManagementIndustrial EcologyBiologyBiochemistryEcology
Mission
As project manager at EPFL School of Continuing Education, Théodore Besson dévelops an international programme of continuing education on Industrial Ecology, in close collaboration with the University of Lausanne and Prof. Suren Erkman. This programme targets all professionals of the various and interdisciplinary fields of environment and also top managers and decision makers, coming both from publi
Kevin SivulaSee webpage for more info limno.epfl.ch
Teaching & PhD PhD Students Odile Louise Andres, Arthur Eliot Bouchez, Benjamin Goldman, Nicolas Johannes Diercks, Aurélie Fanny Marie Célérien, Jiajun Li, Louise Marie Foltzer-De Cian, Melanie Victoria Johanning, Nils William Laurent Golay Past EPFL PhD Students Andrea Gasperini, Pauline Bornoz, Xavier Adrian Jeanbourquin, Xiaoyun Yu, Mathieu Steven Prévot, Muhammad Aiman Bin Rahmanudin Hamdan, Nhât-Tân Vuong, Yongpeng Liu, Arvindh Sekar, Barbara Alexandra Primera
Andrés Ignacio Cristi EspinosaExpertise
- Online Algorithms & Sequential Decision-Making- Algorithmic Game Theory- Mechanism & Market Design
Teaching & PhD PhD Students Jiechen Zhang, Aruzhan Amanbayeva Courses Algorithmic game theory MGT-435 We will study mathematical models of the interplay between algorithms and strategic behavior. We cover fundamental concepts from game theory and mechanism design, including Nash equilibria, the price of anarchy, auctions and market design, incentive compatibility, and online learn
Camille Véronique Bernadette GoemansCamille's research focuses on understanding how antibiotics and non-antibiotic drugs affect the diverse bacteria from the human gut microbiota and how they contribute to dysbiosis and the development of antibiotic resistance. To achieve this goal, she combines systems approaches with molecular microbiology, bacterial genetics and biochemistry.She obtained her Bachelor's and Master's degrees in Biomedical Sciences from the UCLouvain, Belgium, after which she completed her PhD (FRIA national fellowship) at th
Henry MarkramHenry Markram started a dual scientific and medical career at the University of Cape Town, in South Africa. His scientific work in the 80s revealed the polymodal receptive fields of pontomedullary reticular formation neurons in vivo and how acetylcholine re-organized these sensory maps.
He moved to Israel in 1988 and obtained his PhD at the Weizmann Institute where he discovered a link between acetylcholine and memory mechanisms by being the first to show that acetylcholine modulates the NMDA receptor in vitro studies, and thereby gates which synapses can undergo synaptic plasticity. He was also the first to characterize the electrical and anatomical properties of the cholinergic neurons in the medial septum diagonal band.
He carried out a first postdoctoral study as a Fulbright Scholar at the NIH, on the biophysics of ion channels on synaptic vesicles using sub-fractionation methods to isolate synaptic vesicles and patch-clamp recordings to characterize the ion channels. He carried out a second postdoctoral study at the Max Planck Institute, as a Minerva Fellow, where he discovered that individual action potentials propagating back into dendrites also cause pulsed influx of Ca2 into the dendrites and found that sub-threshold activity could also activated a low threshold Ca2 channel. He developed a model to show how different types of electrical activities can divert Ca2 to activate different intracellular targets depending on the speed of Ca2 influx an insight that helps explain how Ca2 acts as a universal second messenger. His most well known discovery is that of the millisecond watershed to judge the relevance of communication between neurons marked by the back-propagating action potential. This phenomenon is now called Spike Timing Dependent Plasticity (STDP), which many laboratories around the world have subsequently found in multiple brain regions and many theoreticians have incorporated as a learning rule. At the Max-Planck he also started exploring the micro-anatomical and physiological principles of the different neurons of the neocortex and of the mono-synaptic connections that they form - the first step towards a systematic reverse engineering of the neocortical microcircuitry to derive the blue prints of the cortical column in a manner that would allow computer model reconstruction.
He received a tenure track position at the Weizmann Institute where he continued the reverse engineering studies and also discovered a number of core principles of the structural and functional organization such as differential signaling onto different neurons, models of dynamic synapses with Misha Tsodyks, the computational functions of dynamic synapses, and how GABAergic neurons map onto interneurons and pyramidal neurons. A major contribution during this period was his discovery of Redistribution of Synaptic Efficacy (RSE), where he showed that co-activation of neurons does not only alter synaptic strength, but also the dynamics of transmission. At the Weizmann, he also found the tabula rasa principle which governs the random structural connectivity between pyramidal neurons and a non-random functional connectivity due to target selection. Markram also developed a novel computation framework with Wolfgang Maass to account for the impact of multiple time constants in neurons and synapses on information processing called liquid computing or high entropy computing.
In 2002, he was appointed Full professor at the EPFL where he founded and directed the Brain Mind Institute. During this time Markram continued his reverse engineering approaches and developed a series of new technologies to allow large-scale multi-neuron patch-clamp studies. Markrams lab discovered a novel microcircuit plasticity phenomenon where connections are formed and eliminated in a Darwinian manner as apposed to where synapses are strengthening or weakened as found for LTP. This was the first demonstration that neural circuits are constantly being re-wired and excitation can boost the rate of re-wiring.
At the EPFL he also completed the much of the reverse engineering studies on the neocortical microcircuitry, revealing deeper insight into the circuit design and built databases of the blue-print of the cortical column. In 2005 he used these databases to launched the Blue Brain Project. The BBP used IBMs most advanced supercomputers to reconstruct a detailed computer model of the neocortical column composed of 10000 neurons, more than 340 different types of neurons distributed according to a layer-based recipe of composition and interconnected with 30 million synapses (6 different types) according to synaptic mapping recipes. The Blue Brain team built dozens of applications that now allow automated reconstruction, simulation, visualization, analysis and calibration of detailed microcircuits. This Proof of Concept completed, Markrams lab has now set the agenda towards whole brain and molecular modeling.
With an in depth understanding of the neocortical microcircuit, Markram set a path to determine how the neocortex changes in Autism. He found hyper-reactivity due to hyper-connectivity in the circuitry and hyper-plasticity due to hyper-NMDA expression. Similar findings in the Amygdala together with behavioral evidence that the animal model of autism expressed hyper-fear led to the novel theory of Autism called the Intense World Syndrome proposed by Henry and Kamila Markram. The Intense World Syndrome claims that the brain of an Autist is hyper-sensitive and hyper-plastic which renders the world painfully intense and the brain overly autonomous. The theory is acquiring rapid recognition and many new studies have extended the findings to other brain regions and to other models of autism.
Markram aims to eventually build detailed computer models of brains of mammals to pioneer simulation-based research in the neuroscience which could serve to aggregate, integrate, unify and validate our knowledge of the brain and to use such a facility as a new tool to explore the emergence of intelligence and higher cognitive functions in the brain, and explore hypotheses of diseases as well as treatments.
Philippe MüllhauptExpertise
Nonlinear Control (Geometry and Algebra)Classical DynamicsRoboticsStatistics
Mission
Provide rigorous technical and scientific training in nonlinear control, classical mechanics, and statistical theory
Current Work
Research and teaching in the fields of control theory, statistics, dynamical systems, and general mechanics.
Philippe Mullhaupt received his Diplôme d Education Ing�nieur | Electricit� 1993 – 1993 EPFL DEA | Automatique et Traitement du Signal 199
Romain ZuffereyTeaching & PhD Courses Biology for engineers MSE-212 This course consists of an introduction to biology and more particularly to biology as a multidisciplinary field, emphasizing natural examples of materials engineering. It should therefore allow engineering students to find inspiration from biology in future materials research problems. Cellular biology and biochemistry for engineers BIO-105 Basic course in biochemistry as well as cellular and molecular biology for non-life
Laura GrigoriExpertise
Numerical linear algebra, deterministic and randomized algorithmsHigh performance computing for scientific applicationsHigh dimensional problems and tensor computationsApplications in astrophysics, molecular simulations, etcCombinatorial scientific computingMathematical Software
Teaching & PhD PhD Students Israa Fakih, Zhipeng Xue, Andrea Di Antonio, Mariana Graciela Martinez Aguilar, Guifré Sánchez i Serra Courses Numerical analysis and computational mathematics MATH-456 The cou
François MaréchalPh D. in engineering Chemical process engineer
Researcher and lecturer in the field of computer aided process and energy systems engineering.
Lecturer in the mechanical engineering, electrical engineering and environmental sciences engineering in EPFL.
I'm responsible for the Minor in Energy of EPFL and I'm involved in 3 projects of the Competence Center in Energy and Mobility (2nd generation biofuel, Wood SOFC, and gas turbine development with CO2 mitigation) in which i'm contributing to the energy conversion system design and optimisation.
Short summary of my scientific carrer
After a graduation in chemical engineering from the University of Liège, I have obtained a Ph. D. from the University of Liège in the LASSC laboratory of Prof. Kalitventzeff (former president of the European working party on computer aided process engineering). This laboratory was one of the pioneering laboratory in the field of Computer Aided Process Engineering.
In the group of Professor Kalitventzeff, I have worked on the development and the applications of data reconciliation, process modelling and optimisation techniques in the chemical process industry, my experience ranges from nuclear power stations to chemical plants. In the LASSC, I have been responsible from the developments in the field of rational use of energy in the industry. My first research topic has been the methodological development of process integration techniques, combining the use of pinch based methods and of mathematical programming: e.g. for the design of multiperiod heat exchanger networks or Mixed integer non linear programming techniques for the optimal management of utility systems. Fronted with applications in the industry, my work then mainly concentrated on the optimal integration of utility systems considering not only the energy requirements but the cost of the energy requirements and the energy conversion systems. I developed methods for analysing and integrating the utility system, the steam networks, combustion (including waste fuel), gas turbines or other advanced energy conversion systems (cogeneration, refrigeration and heat). The techniques applied uses operation research tools like mixed integer linear programming and exergy analysis. In order to evaluate the results of the utility integration, a new graphical method for representing the integration of the utility systems has been developed. By the use of MILP techniques, the method developed for the utility integration has been extended to handled site scale problems, to incorporate environmental constraints and reduce the water usage. This method (the Effect Modelling and Optimisation method) has been successfully applied to the chemical plants industry, the pulp and paper industry and the power plant. Instead of focusing on academic problems, I mainly developed my research based on industrial applications that lead to valuable and applicable patented results. Recently the methods developed have been extended to realise the thermoeconomic optimisation of integrated systems like fuel cells. My present R&D work concerns the application of multi-objective optimisation strategies in the design of processes and integrated energy conversion systems.
Since 2001, Im working in the Industrial Energy Systems Laboratory (LENI) of Ecole Polytechnique fédérale de Lausanne (EPFL) where Im leading the R&D activities in the field of Computer Aided Analysis and Design of Industrial Energy Systems with a major focus on sustainable energy conversion system development using thermo-economic optimisation methodologies. A part from the application and the development of process integration techniques, that remains my major field of expertise, the applications concern :
Rational use of water and energy in Industrial processes and industrial production sites : projects with NESTLE, EDF, VEOLIA and Borregaard (pulp and paper).Energy conversion and process design : biofuels from waste biomass (with GASNAT, EGO and PSI), water dessalination and waste water treatment plant (VEOLIA), power plant design (ALSTOM), Energy conversion from geothermal sources (BFE). Integrated energy systems in urban areas : together with SCANE and SIG (GE) and IEA annexe 42 for micro-cogeneration systems.
I as well contributed to the definition of the 2000 Watt society and to studies concerning the emergence of green technologies on the market in the frame of the Alliance for Global Sustainability.
Marco PicassoExpertise
Computational Science and Engineering
Mission
I am teaching analysis and numerical analysis for engineers and mathematicians at bachelor and master levels.My research pertains to the numerical simulation of complex physical systems with partial differential equations.Here is some bibliometry: Google Scholar, Research Gate, Orcid, here is my most recent CV. Ongoing research projects: - Numerical simulation of aluminium electrolysis, collaboration with RioTinto LRF lab, Ycoorsystems SA and Jacques
