Romain GuietExpertise
Development of BioImage Analysis workflows and algorithms to extract quantitative data from microscopy images.BioSample Preparation : in vitro cell, organoid, time-lapse, fixation, staining strategies, actin, mitochondria, fluorescent protein expressionBioImage Acquisition : Widefield, Confocal, Whole Slide Imaging, Super-resolution (SIM, STORM, STED), FRET, FRAP, FLIMBioImage Analysis: Colocalisation analysis, Deconvolution, Time-lapse , Whole Slide ImagingTools & Software: ImageJ/Fiji, QuPath, i
Francesco VarratoExpertise
Simulation and theory of coarse grained models of soft matter. Studies on colloidal gels, polymer melts, supercooled liquids and glassy systems. Research on physical fractals and dynamically arrested amorphous structures.
Expertise
Simulation and theory of coarse grained models of soft matter. Studies on colloidal gels, polymer melts, supercooled liquids and glassy systems. Research on physical fractals and dynamically arrested amorphous structures.
Teaching & PhD Courses Hands-on with Research
Gioele La MannoTeaching & PhD PhD Students Albert Dominguez Mantes, Xinyi Huang, Laura Lapeña Gil, Alessandro Valente, Luca Fusar Bassini, Hao-An Hsiung, Alireza Gargoorimotlagh, Morgane Alice Storey, Rosan Martine Hans, María Cristina Loureiro Casalderrey, Lada Polyakova Past EPFL PhD Students Alex Russell Lederer, Irina Khven Past EPFL PhD Students as codirector Alexandre Coudray, Alex Russell Lederer, Halima Hannah Emilie Schede, Irina Khven Courses Biological data science I: statistical learning BIOENG-210
Barbara GalimbertiExpertise
Archival science, collections management, and information sciences applied to architectural archives and to heritage and research collections, within the Archives of Modern Construction (ACM) of the École polytechnique fédérale de Lausanne.Standardized archival description, metadata structuring and governance, dissemination of finding aids, and development of digital infrastructures for long-term preservation and access (Morphé / AtoM + Archivematica ; MorphéPlus).Intellectual and physical process
Olivier VerscheureSWISS DATA SCIENCE CENTER
Housed at both EPFL and ETH Zurich, the newly created Swiss Data Science Center (SDSC) will address the fragmentation within today's data and analytics landscapes. The SDSC will be composed of a distributed multi-disciplinary team of data scientists and experts in domains including personalized health and personalized medicine, transportation, earth and environmental science, social science and digital humanities, and economics. The center aims to federate data providers, data and
Johan AuwerxJohan Auwerx is Professor at the École Polytechnique Fédérale in Lausanne, Switzerland, where he occupies the Nestle Chair in Energy Metabolism. Dr. Auwerx has been using molecular physiology and systems genetics to understand metabolism in health, aging and disease. Much of his work focused on understanding how diet, exercise and hormones control metabolism through changing the expression of genes by altering the activity of transcription factors and their associated cofactors. His work was instrumental for the development of agonists of nuclear receptors - a particular class of transcription factors - into drugs, which now are used to treat high blood lipid levels, fatty liver, and type 2 diabetes. Dr. Auwerx was amongst the first to recognize that transcriptional cofactors, which fine-tune the activity of transcription factors, act as energy sensors/effectors that influence metabolic homeostasis. His research validated these cofactors as novel targets to treat metabolic diseases, and spurred the clinical use of natural compounds, such as resveratrol, as modulators of these cofactor pathways.
Johan Auwerx was elected as a member of EMBO in 2003 and is the recipient of a dozen of international scientific prizes, including the Danone International Nutrition Award, the Oskar Minkowski Prize, and the Morgagni Gold Medal. His work is highly cited by his peers with a h-factor of over 100. He is an editorial board member of several journals, including Cell Metabolism, Molecular Systems Biology, The EMBO Journal, Journal of Cell Biology, Cell, and Science. Dr. Auwerx co-founded a handful of biotech companies, including Carex, PhytoDia, and most recently Mitobridge, and has served on several scientific advisory boards.
Dr. Auwerx received both his MD and PhD in Molecular Endocrinology at the Katholieke Universiteit in Leuven, Belgium. He was a post-doctoral research fellow in the Departments of Medicine and Genetics of the University of Washington in Seattle.
Berend SmitBerend Smit received an MSc in Chemical Engineering in 1987 and an MSc in Physics both from the Technical University in Delft (the Netherlands). He received in 1990 cum laude PhD in Chemistry from Utrecht University (the Netherlands). He was a (senior) Research Physicists at Shell Research from 1988-1997, Professor of Computational Chemistry at the University of Amsterdam (the Netherlands) 1997-2007.
In 2004 Berend Smit was elected Director of the European Center of Atomic and Molecular Computations (CECAM) Lyon France. Since 2007 he is Professor of Chemical Engineering and Chemistry at U.C. Berkeley and Faculty Chemist at Materials Sciences Division, Lawrence Berkeley National Laboratory. Since 2014 he has been director of the Energy Center at EPFL.
Luc PatinyExpertise
Cheminformatics, Data management, Data processing, Javascript developmentLast updated on April 16, 2023.
Teaching & PhD Courses Advanced general chemistry II CH-120 Fundamental knowledge on the reactivity of organic compounds and their identification by mass spectrometry, IR spectroscopy and nuclear magnetic resonance. Basic and advanced NMR - Level 1 A (EPFL) CH-601(x) Basic theoretical and experimental aspects of NMR will be taught. Students will be familarized w
Chiara GabellaTeaching & PhD Courses Hands-on with Research Data Management in Chemistry ChE-601 PhD students in Chemistry will learn hands-on Research Data Management (RDM) skills transferable to their research practices. They willcontextualize their research into RDM best practices (day 1), discover appropriate tools (day 2) and work on a project (day 3) for the courseaccreditation
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