Maria BrbicMaria Brbic is an assistant professor in computer science at EPFL. Prior to joining EPFL, Maria was a postdoctoral researcher in Computer Science at Stanford University working with Jure Leskovec. She received her PhD degree from University of Zagreb in 2019, while also researching at Stanford University and University of Tokyo. Her research was awarded with the Fulbright Scholarship, L’Oreal UNESCO for Women in Science Scholarship, Branimir Jernej award for outstanding publication in biology and biomedicine, and Josip Loncar Silver Plaque award for the best doctoral dissertation. She has been named a Rising Star in EECS by MIT in 2021. Her research is focused on developing new machine learning methods and applying her methods to advance biomedical research.
Bruno Emanuel Ferreira De Sousa CorreiaThroughout my PhD and postdoctoral studies I was trained in world-renowned laboratories and institutions in the United States of America (University of Washington and The Scripps Research Institute). Very early in my scientific career I found out my fascination about protein structure and function. My PhD studies evolved in the direction of immunogen design and vaccine engineering which sparked my interest in the many needs and opportunities in vaccinology and translational research. My efforts resulted in an enlightening piece of work where for the first time, computationally designed immunogens elicited potent neutralizing antibodies. During my postdoctoral studies I joined a chemical biology laboratory at the Scripps Research Institute. In this stage I developed novel chemoproteomics methods for the identification of protein-small molecule interaction sites in complex proteomes. In March 2015, I joined the École Polytechnique Fédérale de Lausanne (EPFL) – Switzerland as a tenure track assistant professor. The focus of my research group is to develop computational tools for protein design with particular emphasis in applying these strategies to immunoengineering (e.g. vaccine and cancer immunotherapy). The activities in my laboratory focus on computational design methods development and experimental characterization of the designed proteins. Our laboratory has been awarded with 2 prestigious research grants from the European Research Council. Lastly, I have been awarded the prize for best teacher of Life sciences in 2019.
Benoît Jean Dominique FerrariDr. Benoît J.D. Ferrari studied Biochemistry and Biology and completed his PhD in Ecotoxicology at the University of Lorraine (Metz, France) in 2000. After several years at the University of Geneva (Forel F.A. Institute, Geneva, Switzerland; 2002-2008) and Irstea (Formerly Cemagref, Lyon, France; 2000-2002 and 2008-2013), he joined the Swiss Centre of Applied Ecotoxicology (Centre Ecotox Eawag/EPFL) in October 2013 as group leader of the soil and sediment ecotoxicology group at Lausanne. During his different mandates, he was implied as (co-)proponent in different research projects supported e.g. by the Swiss Federal Office for the Environment, the Swiss National Science Foundation, the French National Research Agency or the European Framework Programme for Research. His main areas of interest cover the ecodynamic of contaminants and their impact on the ecophysiology of organisms. Particularly, he is involved in 1) the development of exposure and effect indicators to evaluate the chemical stresses, 2) the integration of such indicators in laboratory- and field-based approaches to assess the quality of aquatic ecosystems, 3) the development of adapted bioassays for active biomonitoring, and 4) the transfer of such ecotoxicological tools and approaches towards end-users.
James Richard LarusExpertise
James Larus is a Professor Emeritus and former Dean of the School of Computer and Communication Sciences (IC) at EPFL (école Polytechnique Fédérale de Lausanne). Before joining IC in October 2013, Larus was a researcher, manager, and director in Microsoft Research for over 16 years and an Assistant and Associate Professor in the Computer Sciences Department at the University of Wisconsin, Madison.Larus has been an active contributor to numerous communities. He published over 100 papers (with 14 be
Hannes Markus PeterCurrent work
I am a microbial ecologist and mainly interested in factors shaping bacterial communities and functioning in freshwater ecosystems. I use combinations of field observations, experiments and molecular techniques to test hypotheses regarding the assembly of microbial communities, the influence of environmental variability and relationships between diversity and funcioning. I enjoy working in alpine environments, which are sensitive to climate change and represent excellent model systems.
Teaching
Andrea AblasserTeaching & PhD PhD Students Ekaterina Gorbacheva, Iris Arianna Dorschel, Tieliang Gan, Yu Meng Past EPFL PhD Students Simone Margret Haag, Sélène Glück, Marilena Wischnewski, Sophie Rivara, Natasha Samson Courses Immunology - advances and therapeutic implications BIO-479 The students acquire advanced level knowledge regarding the functioning of the (vertebrate) immune system. A strong focus is placed on the molecular mechanisms underlying innate and adaptive immune responses and their impl
Rudolf HoviusExpertise
•Protein structure, expression & purification•Molecular interaction & receptor activation•Fluorescence imaging & spectroscopySignalling & sensing
Mission
=> Teaching: Lecture courses, tutorials and practicals in biochemistry, biophysical chemistry of membranes and signalling processes. Participating to the Commission d'Enseignement and Commission de l'Ecole Doctorale of Chemistry and Chemical Engineering.=> Research interests: Protein function and structure, Membrane protein (especially recepto
Vassily HatzimanikatisDr. Vassily Hatzimanikatis is currently Associate Professor of Chemical Engineering and Bioengineering at Ecole Polytechnique Federale de Lausanne (EPFL), in Lausanne, Switzerland. Vassily received a PhD and an MS in Chemical Engineering from the California Institute of Technology, and his Diploma in Chemical Engineering from the University of Patras, in Greece. After the completion of his doctoral studies, he held a research group leader position at the Swiss Federal Institute of Technology in Zurich (ETHZ), Switzerland. Prior to joining EPFL, Vassily worked for three years in DuPont, Cargill, and Cargill Dow, and he has been assistant professor at Northwestern University, at Illinois, USA.
Vassilys research interests are in the areas of computational systems biology, biotechnology, and complexity. He is associate editor of the journals Biotechnology & Bioengineering, Metabolic Engineering and Integrative Biology, and he serves on the editorial advisory board of the journals Bioprocess and Biosystems Engineering, Journal of Chemical Technology and Biotechnology, and Industrial Biotechnology. He has written over 70 technical publications and he is co-inventor in three patents and patent applications.
Vassily is a fellow of the American Institute for Medical and Biological Engineering (2010), he was a DuPont Young Professor (2001-2004), and he has also received the Jay Bailey Young Investigator Award in Metabolic Engineering (2000), and the ACS Elmar Gaden Award (2011).
Lucas Pierre Antoine PaoliCurriculum vitae 2024-Now: ELISIR Scholar (Group Leader), EPFL (CH)2023-2024: EMBO Postdoctoral Fellow, MDM Lab, Institut Pasteur (FR)2018-2023: PhD in Microbiome Research, Sunagawa Lab, ETH Zürich (CH)2017-2018: M.Phil. in Environmental Policy, University of Cambridge (UK)2015-2017: M.Sc. in Ecology and Evolution, Ecole normale supérieure (FR)
Teaching & PhD PhD Students Sobhan Ahmadianmoghadam, Agathe Bredel, Shiro Otaki, Hale-Seda Ivo Radoykova
Marco MattavelliTeaching & PhD Past EPFL PhD Students Christophe Clerc, Ruohua Zhou, Beilu Shao, Christophe Lucarz, Richard Thavot, Ab Al Hadi Bin Ab Rahman, Endri Bezati, Simone Casale Brunet, Malgorzata Michalska, Ana Angelica Hernandez Lopez, Aurélien Bloch, Mustafa Besirli, Ünsal Öztürk Past EPFL PhD Students as codirector Sylvain Aguirre Courses Systems and architectures for signal processing EE-555 Study of the essential components and implementation technologies of digital signal processing and commu
