Publications associées à Conformational analysis of nucleic acids revisited: Curves

New SIDH Countermeasures for a More Efficient Key Exchange

The Supersingular Isogeny Diffie-Hellman (SIDH) protocol has been the main and most efficient isogeny-based encryption protocol, until a series of breakthroughs led to a polynomial-time key-recovery attack. While some countermeasures have been proposed, th ...

Springer2023

Novel multi-crack damage approach for pultruded fiber-polymer web-flange junctions

Thomas Keller

This paper aims to propose a novel approach to assess the multi-crack behavior of layered fiber-polymer composites. The Compliance and R-curves generated from this novel approach were useful to understand the multiple delamination process, enabling to eval ...

Elsevier Sci Ltd2023

Recycling of Polymerase Chain Reaction (PCR) Kits

Francesco Stellacci, Yong Zhu, Weina Liu

Polymerase chain reaction (PCR) kits have been used as common diagnosing tools during the outbreak of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic, with daily worldwide usage in the millions. It is well known that at the beginn ...

AMER CHEMICAL SOC2023

Landscapes of DNA Mechanics and Genomes

Thomas Antonin Zwahlen

The local physical properties - such as shape and flexibility - of the DNA double-helix is today widely believed to be influenced by nucleic acid sequence in a non-trivial way. Furthermore, there is strong evidence that these properties play a role in many ...

EPFL2023

cgNA plus web : A Visual Interface to the cgNA plus Sequence-dependent Statistical Mechanics Model of Double-stranded Nucleic Acids

John Maddocks, Alessandro Samuele Patelli, Lennart de Bruin, Rahul Sharma

The sequence-dependent statistical mechanics of double-stranded nucleic acid, or dsNA, is believed to be essential in its biological functions. In turn, the equilibrium statistical mechanics behaviour of dsNA depends strongly both on sequence-dependent per ...

Elsevier2023

Algebra and geometry of link homology Lecture notes from the IHES 2021 Summer School

Oscar Salomon Kivinen

These notes cover the lectures of the first named author at 2021 IHES Summer School on "Enumerative Geometry, Physics and Representation Theory" with additional details and references. They cover the definition of Khovanov-Rozansky triply graded homology, ...

WILEY2022

Probing the buckling of pressurized spherical shells

Pedro Miguel Nunes Pereira de Almeida Reis, Dong Yan, Arefeh Abbasi

The prediction of the critical buckling conditions of shell structures is plagued by imperfection sensitivity. Non-destructive testing through point-load probing has been recently proposed to map the stability landscape of cylindrical shells. However, the ...

2021

Efficient equilibrium-based stress recovery for isogeometric laminated curved structures

Pablo Antolin Sanchez, Alessandro Reali

This work extends the stress recovery for laminated composite solid plates, proposed in [1,2], to curved structures. Based on 3D Isogeometric Analysis (IGA) computations and equilibrium, this procedure uses a single element through the thickness in combina ...

ELSEVIER SCI LTD2021

Electronic and structural dynamics in DNA single strands

Benjamin Bauer

The absorption, conversion and transport of electronic energy in molecular aggregates is at the heart of many important natural and artificial photochemical systems, including organic solar cell materials, photosynthetic light-harvesting complexes and DNA ...

EPFL2021

Sparsely Observed Functional Time Series: Theory and Applications

Tomas Rubin

Functional time series is a temporally ordered sequence of not necessarily independent random curves. While the statistical analysis of such data has been traditionally carried out under the assumption of completely observed functional data, it may well ha ...

EPFL2021

Variations on R-curves and traction-separation relations in DCB specimens loaded under end opening forces or pure moments

John Botsis, Georgios Pappas

In this work the differences in R-curve response and traction-separation relations due to a finite damage zone or large-scale bridging (LSB) in mode I fracture on double cantilever beams (DCB) were investigated under end opening forces (EOF) and pure momen ...

PERGAMON-ELSEVIER SCIENCE LTD2020

Sparsely observed functional time series: estimation and prediction

Victor Panaretos, Tomas Rubin

Functional time series analysis, whether based on time or frequency domain methodology, has traditionally been carried out under the assumption of complete observation of the constituent series of curves, assumed stationary. Nevertheless, as is often the c ...

INST MATHEMATICAL STATISTICS2020

Many touchings force many crossings

János Pach

Given n continuous open curves in the plane, we say that a pair is touching if they have finitely many interior points in common and at these points the first curve does not get from one side of the second curve to its other side. Otherwise, if the two cur ...

ACADEMIC PRESS INC ELSEVIER SCIENCE2019

A sequence-dependent coarse-grain model of B-DNA with explicit description of bases and phosphate groups parametrised from large scale Molecular Dynamics simulations

Alessandro Samuele Patelli

We introduce a sequence-dependent coarse-grain model of double-stranded DNA with an explicit description of both the bases and the phosphate groups as interacting rigid-bodies. The model parameters are trained on extensive, state-of-the-art large scale mol ...

EPFL2019

Ordered Graphs And Large Bi-Cliques In Intersection Graphs Of Curves

János Pach, Istvan Tomon

An ordered graph G(

COMENIUS UNIV2019

Ordered graphs and large bi-cliques in intersection graphs of curves

János Pach, Istvan Tomon

An ordered graph G(

ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD2019

Reconstructing the spectral shape of a stochastic gravitational wave background with LISA

Daniel Garcia Figueroa

We present a set of tools to assess the capabilities of LISA to detect and reconstruct the spectral shape and amplitude of a stochastic gravitational wave background (SGWB). We first provide the LISA power-law sensitivity curve and binned power-law sensiti ...

IOP PUBLISHING LTD2019

Electronic Relaxation Dynamics of UV-Photoexcited 2-Aminopurine-Thymine Base Pairs in Watson-Crick and Hoogsteen Conformations

Rebecca Ann Ingle, Hugo Jean Baptiste Marroux

The fluorescent analogue 2-aminopurine (2AP) of the canonical nucleobase adenine (6-aminopurine) base-pairs with thymine (T) without disrupting the helical structure of DNA. It therefore finds frequent use in molecular biology for probing DNA and RNA struc ...

AMER CHEMICAL SOC2019

Arithmetic and geometric structures in cryptography

Benjamin Pierre Charles Wesolowski

We explore a few algebraic and geometric structures, through certain questions posed by modern cryptography. We focus on the cases of discrete logarithms in finite fields of small characteristic, the structure of isogeny graphs of ordinary abelian varietie ...

EPFL2018

Pattern formation in thin liquid films: from coating-flow instabilities to microfluidic droplets

Gioele Mariano Nicolò Balestra

Nature and technical applications abound with thin viscous flows, ranging from the lava flow on volcanoes to the lubricating layer around confined bubbles in the microchannels of Lab-on-a-Chip devices. Countless are the examples where coating flows arise i ...

EPFL2018