Publication

Is There a Size Limit for Cosmopolitan Distribution in Free-Living Microorganisms? A Biogeographical Analysis of Testate Amoebae from Polar Areas

Publications associées (26)

The microbial genomics of glacier-fed streams: adaptations to an extreme ecosystem

Glacier-fed streams are the cold, ultra-oligotrophic, and unstable streams that are fed by glacial meltwater. Despite these extreme conditions, they harbour a diverse and abundant microbial diversity that develops into biofilms, covering the boulders and s ...

EPFL2024

Diagenetic isotope exchange in biocalcites for paleoclimate reconstruction

Deyanira Graciela Cisneros Lazaro

The oxygen isotope compositions of fossil biocalcites, such as foraminifera, bivalves, brachiopods, and belemnites have allowed for reconstructions of sea surface and deep ocean temperatures throughout the Phanerozoic and constitute the most important reco ...

EPFL2024

What happens to biomass burning-emitted particles in the ocean? A laboratory experimental approach based on their tracers

Christos Panagiotopoulos

Wildfires, controlled burns, and biofuel combustion (biomass burning or BB) are major contributors to particulate matter in the atmosphere and thus have an impact on climate, human health, and ecosystems. Once emitted, the particulate matter derived from B ...

Elsevier2023

Fish Diversity in Relation to Littoral Habitats in Three Basins of Lake Kivu (East Africa)

Alfred Johny Wüest

In total, 28 of the 29 fish species reported from the Lake Kivu basin occur in the littoral zone of the lake, but information about their structure, occurrence, and the habitats affecting their distribution is largely lacking. The lake's inshore area is po ...

MDPI2023

The biofilm ecology of proglacial floodplain streams

Jade Brandani

Glacial forelands figure among the most dynamic landscapes on Earth, and their formation is currently accelerating given glacier shrinkage. Draining these forelands are streams hosting unique microbial communities, which have the capacity to impact both th ...

EPFL2023

Soil protist function varies with elevation in the Swiss Alps

Nicolas Jean Philippe Guex, Enrique Lara, Edward Mitchell, Aline Buri

Protists are abundant and play key trophic functions in soil. Documenting how their trophic contributions vary across large environmental gradients is essential to understand and predict how biogeochemical cycles will be impacted by global changes. Here, u ...

2022

Aerobiology over the Southern Ocean – implications for bacterial colonization of Antarctica

Julia Schmale

Parts of the Antarctic are experiencing dramatic ecosystem change due to rapid and record warming, which may weaken biogeographic boundaries and dispersal barriers, increasing the risks of biological invasions. In this study, we collected air samples from ...

2022

Phylogenetic estimation of the viral fitness landscape of HIV-1 set-point viral load

Jacques Fellay, Luca Ferretti

Set-point viral load (SPVL), a common measure of human immunodeficiency virus (HIV)-1 virulence, is partially determined by viral genotype. Epidemiological evidence suggests that this viral property has been under stabilising selection, with a typical opti ...

OXFORD UNIV PRESS2022

En quête d’habitat intermédiaire périurbain

Emmanuel Rey, Frédéric Frank

S’il est un modèle d’habitat associé aux périphéries urbaines, c’est bien celui de la maison individuelle. Intimement liée à l’essor de la mobilité automobile, la propagation de ce type d’habitation dans les campagnes entourant les villes fait partie intég ...

Presses polytechniques et universitaires romandes2022

The molecular treasure box of environmental Vibrio cholerae strains

Natalia Carolina Drebes Dorr

Cholera pandemics have been affecting humankind for centuries and are still considered a major public health problem, especially in regions around the world with poor access to clean water and sanitation. Cholera pandemics are caused by a specific lineage ...

EPFL2021

Global radiation in a rare biosphere soil diatom

Tyler Joe Kohler

Soil micro-organisms drive the global carbon and nutrient cycles that underlie essential ecosystem functions. Yet, we are only beginning to grasp the drivers of terrestrial microbial diversity and biogeography, which presents a substantial barrier to under ...

Nature Research2020

Evaluating Alternative Metacommunity Hypotheses for Diatoms in the McMurdo Dry Valleys Using Simulations and Remote Sensing Data

Tyler Joe Kohler

Diatoms are diverse and widespread freshwater Eukaryotes that make excellent microbial subjects for addressing questions in metacommunity ecology. In the McMurdo Dry Valleys of Antarctica, the simple trophic structure of glacier-fed streams provides an ide ...

2020

Heterotrophic Foraminifera Capable of Inorganic Nitrogen Assimilation

Anders Meibom, Charlotte Madeleine Nicole Lekieffre, Emmanuelle Geslin

Nitrogen availability often limits biological productivity in marine systems, where inorganic nitrogen, such as ammonium is assimilated into the food web by bacteria and photoautotrophic eukaryotes. Recently, ammonium assimilation was observed in kleptopla ...

Frontiers Media SA2020

A modern scleractinian coral with a two-component calcite–aragonite skeleton

Anders Meibom, Jaroslaw Hubert Stolarski

One of the most conserved traits in the evolution of biomineralizing organisms is the taxon-specific selection of skeletal minerals. All modern scleractinian corals are thought to produce skeletons exclusively of the calcium-carbonate polymorph aragonite. ...

2021

Ammonium is the preferred source of nitrogen for planktonic foraminifer and their dinoflagellate symbionts

Anders Meibom, Charlotte Madeleine Nicole Lekieffre, Emmanuelle Geslin

The symbiotic planktonic foraminiferaOrbulina universainhabits open ocean oligotrophic ecosystems where dissolved nutrients are scarce and often limit biological productivity. It has previously been proposed thatO. universameets its nitrogen (N) requiremen ...

ROYAL SOC2020

Heterotrophy in the earliest gut: a single-cell view of heterotrophic carbon and nitrogen assimilation in sponge-microbe symbioses

Anders Meibom, Stéphane Laurent Escrig

Sponges are the oldest known extant animal-microbe symbiosis. These ubiquitous benthic animals play an important role in marine ecosystems in the cycling of dissolved organic matter (DOM), the largest source of organic matter on Earth. The conventional vie ...

NATURE PUBLISHING GROUP2020

Edge influence on understorey plant communities depends on forest management

Matteo Tolosano

Questions Does the influence of forest edges on plant species richness and composition depend on forest management? Do forest specialists and generalists show contrasting patterns? ...

WILEY2020

A method to disentangle and quantify host anabolic turnover in photosymbiotic holobionts with subcellular resolution

Arnaud Comment, Anders Meibom, Maoz Fine, Emma Mary Gibbin, Guilhem Maurice Louis Banc-Prandi

A wide range of organisms host photosynthesizing symbionts. In these animals the metabolic exchange between host and symbionts has prevented in situ host anabolic turnover to be studied without the confounding effect of translocated photosynthates. Using t ...

2020

Dispersal limitations and historical factors determine the biogeography of specialized terrestrial protists

Enrique Lara, Edward Mitchell, Bertrand Fournier, Luca Bragazza, Mariusz Lamentowicz

Recent studies show that soil eukaryotic diversity is immense and dominated by micro-organisms. However, it is unclear to what extent the processes that shape the distribution of diversity in plants and animals also apply to micro-organisms. Major diversif ...

WILEY2019

A case-study evaluating river rehabilitation alternatives and habitat heterogeneity using the hydromorphological index of diversity

Anton Schleiss, Walter Gostner

Concurrent rehabilitation alternatives were evaluated for a 1900 m reach of the River Etsch in northern Italy using a recently developed Hydro Morphological Index of Diversity (HMID) model. HMID is a new tool enabling quantitative assessments of river rest ...

2019