Publications associées à A comparative study on network alignment techniques

Publications associées (38)

Deep learning approach for identification of H II regions during reionization in 21-cm observations - II. Foreground contamination

Jean-Paul Richard Kneib, Emma Elizabeth Tolley, Michele Bianco, Tianyue Chen

The upcoming Square Kilometre Array Observatory will produce images of neutral hydrogen distribution during the epoch of reionization by observing the corresponding 21-cm signal. However, the 21-cm signal will be subject to instrumental limitations such as ...

Oxford Univ Press2024

Domain adaptation via alignment of operation profile for Remaining Useful Lifetime prediction

Olga Fink, Ismail Nejjar, Mengjie Zhao

Effective Prognostics and Health Management (PHM) relies on accurate prediction of the Remaining Useful Life (RUL). Data-driven RUL prediction techniques rely heavily on the representativeness of the available time-to-failure trajectories. Therefore, these ...

Elsevier2024

Task-driven neural network models predict neural dynamics of proprioception: Experimental data, activations and predictions of neural network models

Alexander Mathis, Alberto Silvio Chiappa, Alessandro Marin Vargas, Axel Bisi

Here we provide the neural data, activation and predictions for the best models and result dataframes of our article "Task-driven neural network models predict neural dynamics of proprioception". It contains the behavioral and neural experimental data (cu ...

EPFL Infoscience2024

Prolamins' 3D structure: A new insight into protein modeling using the language of numbers and shapes

Niloufar Sharif

This study combined protein modeling methods to generate the prolamins' fractions as precise as possible. Hence, gliadins, zeins, kafirins, hordeins, secalins, avenins and oryzins were generated based on their characteristics and disulfide mapping. Finding ...

Elsevier Sci Ltd2024

A KL Divergence-Based Loss for In Vivo Ultrafast Ultrasound Image Enhancement with Deep Learning: Dataset (6/6)

Jean-Philippe Thiran, Roser Vinals Terres

This dataset contains a collection of ultrafast ultrasound acquisitions from nine volunteers and the CIRS 054G phantom. For a comprehensive understanding of the dataset, please refer to the paper: Viñals, R.; Thiran, J.-P. A KL Divergence-Based Loss for In ...

EPFL Infoscience2024

Infusing structured knowledge priors in neural models for sample-efficient symbolic reasoning

Mattia Atzeni

The ability to reason, plan and solve highly abstract problems is a hallmark of human intelligence. Recent advancements in artificial intelligence, propelled by deep neural networks, have revolutionized disciplines like computer vision and natural language ...

EPFL2024

Predicting protein interactions using geometric deep learning on protein surfaces

Freyr Sverrisson

In the domain of computational structural biology, predicting protein interactions based on molecular structure remains a pivotal challenge. This thesis delves into this challenge through a series of interconnected studies. The first chapter introduces th ...

EPFL2024

Random matrix methods for high-dimensional machine learning models

Antoine Philippe Michel Bodin

In the rapidly evolving landscape of machine learning research, neural networks stand out with their ever-expanding number of parameters and reliance on increasingly large datasets. The financial cost and computational resources required for the training p ...

EPFL2024

Investigating the intra-molecular and inter-molecular effects of post-translational modifications on intrinsically disordered protein regions and structured protein regions

Zhidian Zhang

Post-translational modifications (PTMs) play a pivotal role in regulating protein structure, interaction, and function. Aberrant PTM patterns are associated with diseases. Moreover, individual PTMs have a complex interaction with each other, known as PTM c ...

EPFL2024

Uncertainty-aware Flexibility Envelope Prediction in Buildings with Controller-agnostic Battery Models

Colin Neil Jones, Rafael Eduardo Carrillo Rangel, Paul Scharnhorst

Buildings are a promising source of flexibility for the application of demand response. In this work, we introduce a novel battery model formulation to capture the state evolution of a single building. Being fully data-driven, the battery model identificat ...

IEEE2023

Estimating the Topology of Preferential Attachment Graphs Under Partial Observability

Ali H. Sayed

This work addresses the problem of learning the topology of a network from the signals emitted by the network nodes. These signals are generated over time through a linear diffusion process, where neighboring nodes exchange messages according to the underl ...

IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC2023

Localized model order reduction and domain decomposition methods for coupled heterogeneous systems

Jan Sickmann Hesthaven, Niccolo' Discacciati

We propose a model order reduction technique to accurately approximate the behavior of multi-component systems without any a-priori knowledge of the coupled model. In the offline phase, we construct independent surrogate models by solving the local problem ...

Wiley2023

A new age in protein design empowered by deep learning

Bruno Emanuel Ferreira De Sousa Correia, Michael Bronstein, Casper Alexander Goverde, Arne Schneuing, Hamed Khakzad, Ilia Igashov

The rapid progress in the field of deep learning has had a significant impact on protein design. Deep learning methods have recently produced a breakthrough in protein structure prediction, leading to the availability of high-quality models for millions of ...

Cell Press2023

Towards learning-based denoising of light fields

Touradj Ebrahimi, Michela Testolina

In recent years, new emerging immersive imaging modalities, e.g. light fields, have been receiving growing attention, becoming increasingly widespread over the years. Light fields are often captured through multi-camera arrays or plenoptic cameras, with th ...

2023

Leaderless consensus

Rachid Guerraoui, Vincent Gramoli, Mihail Igor Zablotchi, Karolos Antoniadis, Gauthier Jérôme Timothée Voron

Classic synchronous consensus algorithms are leaderless in that processes exchange proposals, choose the maximum value and decide when they see the same choice across a couple of rounds. Indulgent consensus algorithms are typically leader-based. Although t ...

ACADEMIC PRESS INC ELSEVIER SCIENCE2023

Acceleration of graph pattern mining and applications to financial crime

Jovan Blanusa

Various forms of real-world data, such as social, financial, and biological networks, can be represented using graphs. An efficient method of analysing this type of data is to extract subgraph patterns, such as cliques, cycles, and motifs, from graphs. For ...

EPFL2023

From event-based surprise to lifelong learning. A journey in the timescales of adaptation

Martin Louis Lucien Rémy Barry

Humans and animals constantly adapt to their environment over the course of their life. This thesis seeks to integrate various timescales of adaptation, ranging from the adaptation of synaptic connections between spiking neurons (milliseconds), rapid behav ...

EPFL2023

De novo protein design by inversion of the AlphaFold structure prediction network

Benedict Dieter Gregor Wolf, Bruno Emanuel Ferreira De Sousa Correia, Stéphane Rosset, Casper Alexander Goverde, Hamed Khakzad

De novo protein design enhances our understanding of the principles that govern protein folding and interactions, and has the potential to revolutionize biotechnology through the engineering of novel protein functionalities. Despite recent progress in comp ...

2023

Deep Learning for 3D Surface Modelling and Reconstruction

Benoît Alain René Guillard

In recent years, there has been a significant revolution in the field of deep learning, which has demonstrated its effectiveness in automatically capturing intricate patterns from large datasets. However, the majority of these successes in Computer Vision ...

EPFL2023

Linear Complexity Self-Attention With 3rd Order Polynomials

Grigorios Chrysos

Self-attention mechanisms and non-local blocks have become crucial building blocks for state-of-the-art neural architectures thanks to their unparalleled ability in capturing long-range dependencies in the input. However their cost is quadratic with the nu ...

Ieee Computer Soc2023