Publications associées à Cellpose training data and scripts from "Machine learning for histological annotation and quantification of cortical layers"

Publications associées (24)

Intelligent and Self-Driving Microscopy of Protein Aggregation in Neurodegenerative Diseases

Neurodegenerative diseases, such as Alzheimer's, Parkinson's, and Huntington's, afflict tens of millions of patients worldwide. They are characterized by protein aggregation and progressive neuronal loss, leading to cognitive and motor impairments, and ult ...

EPFL2025

Robust and Personalized Federated Learning: Handling Data Corruption and Heterogeneity

Ljubomir Rokvic

Federated Learning (FL) has emerged as a transformative paradigm in machine learning, enabling collaborative model training across decentralized devices while preserving data privacy. However, FL's success is highly contingent on the quality and integrity ...

EPFL2025

Deep learning approach for identification of Hii regions during reionization in 21-cm observations – III. image recovery

Michele Bianco, Tianyue Chen, Shreyam Parth Krishna

The low-frequency component of the upcoming Square Kilometre Array Observatory (SKA-Low) will be sensitive enough to construct 3D tomographic images of the 21-cm signal distribution during reionization. However, foreground contamination poses challenges fo ...

Oxford University Press (OUP)2025

Learning transferable land cover semantics for open vocabulary interactions with remote sensing images

Devis Tuia, Javiera Francisca Castillo Navarro, Valérie Zermatten

Why should we confine land cover classes to rigid and arbitrary definitions? Land cover mapping is a central task in remote sensing image processing, but the rigorous class definitions can sometimes restrict the transferability of annotations between datas ...

2025

Adaptive Interface-Pinns (Adai-Pinns) for Transient Diffusion: Applications to Forward and Inverse Problems in Heterogeneous Media

Brice Tanguy Alphonse Lecampion

We model transient diffusion in heterogeneous materials using a novel physics-informed neural networks framework (PINNs) termed Adaptive interface physics-informed neural networks or AdaI-PINNs (Roy et al. arXiv preprint arXiv:2406.04626, 2024). AdaI-PINNs ...

Elsevier BV2025

Constrained Zero-Shot Neural Architecture Search on Small Classification Dataset

Liza Carol Andrea Dunbar

The rapid evolution of Deep Learning (DL) has brought about significant transformations across scientific domains, marked by the development of increasingly intricate models demanding powerful GPU platforms. However, edge applications like wearables and mo ...

IEEE2024

Distributed Machine Learning Targeting Embedded Systems for Epilepsy Detection

Saleh Baghersalimi

Epileptic seizure detection and monitoring is critical in healthcare, particularly for individuals requiring continuous oversight. Current methods, primarily based on electroencephalogram (EEG) technologies, face limitations due to their complexity in term ...

EPFL2024

PyTorch 2 Model for the prediction of single-artery segmentations for "AngioPy segmentation: An open-source, user-guided deep learning tool for coronary artery segmentation"

Edward Carlo Giorgio Andò, Thabodhan Mahendiran

These are pytorch model weights for the angiopy-segmentation deep learning model, descriped in a paper published in 2024 in the International Journal of Cardiology: AngioPy segmentation: An open-source, user-guided deep learning tool for coronary artery se ...

Zenodo2024

Bridging Discrete Choice Modeling and Neural Networks: Unifying Statistical Rigor and Predictive Power

Brian Alan Tappy-Sifringer

This thesis explores the innovative integration of Discrete Choice Modeling (DCM) and Machine Learning (ML), specifically Neural Networks (NN), within the transportation sector. DCM, with its highly interpretable and hand-designed models grounded in robust ...

EPFL2024

Bootstrapping Autonomous Driving Radars with Self-Supervised Learning

Haitham Al Hassanieh, Junfeng Guan

The perception of autonomous vehicles using radars has attracted increased research interest due its ability to operate in fog and bad weather. However, training radar models is hindered by the cost and difficulty of annotating largescale radar data. To ov ...

IEEE2024

Materials science experiments by robotic automation

Vincenzo Scamarcio

The increasing demand for precision, reproducibility, and scalability in scientific research has driven the development of advanced robotic systems for laboratory automation. This thesis presents the design, implementation, and validation of a mobile robot ...

EPFL2024

Quantum Variational Algorithms: Exploring Applications and Potentials Amid Trainability and Classical Simulability Limitations

Su Yeon Chang

Since its proposal, quantum computing has made significant strides in various domains. Among the different emerging techniques, Variational Quantum Algorithms (VQAs) have become one of the most promising approaches in the current era, where quantum computa ...

EPFL2024

Modeling the ferroelectric phase transition in barium titanate with DFT accuracy and converged sampling

Michele Ceriotti, Alexander Jan Goscinski, Lorenzo Gigli

The accurate description of the structural and thermodynamic properties of ferroelectrics has been one of the most remarkable achievements of density functional theory (DFT). However, running large simulation cells with DFT is computationally demanding, wh ...

2024

Annotation Cost-Efficient Active Learning for Deep Metric Learning-Driven Remote Sensing Image Retrieval

Gencer Sümbül

Deep metric learning (DML) has shown to be effective for content-based image retrieval (CBIR) in remote sensing (RS). Most of the DML methods for CBIR rely on a high number of annotated images to accurately learn model parameters of deep neural networks (D ...

2024

Facilitated machine learning for image-based fruit quality assessment

Fernando Perez Cruz

Image-based machine learning models can be used to make the sorting and grading of agricultural products more efficient. In many regions, implementing such systems can be difficult due to the lack of centralization and automation of postharvest supply chai ...

2023

Depth Estimation for Egocentric Rehabilitation Monitoring Using Deep Learning Algorithms

Kamiar Aminian

Upper limb impairment is one of the most common problems for people with neurological disabilities, affecting their activity, quality of life (QOL), and independence. Objective assessment of upper limb performance is a promising way to help patients with n ...

MDPI2022

RG-Flow: a hierarchical and explainable flow model based on renormalization group and sparse prior

Dian Wu

Flow-based generative models have become an important class of unsupervised learning approaches. In this work, we incorporate the key ideas of renormalization group (RG) and sparse prior distribution to design a hierarchical flow-based generative model, RG ...

IOP Publishing Ltd2022

Optimum trajectory learning in musculoskeletal systems with model predictive control and deep reinforcement learning

Henry Markram, Marc-Oliver Gewaltig

From the computational point of view, musculoskeletal control is the problem of controlling high degrees of freedom and dynamic multi-body system that is driven by redundant muscle units. A critical challenge in the control perspective of skeletal joints w ...

2022

Detecting Freezing of Gait in Parkinson's Disease Patient via Deep Residual Network

Mohamed Bouri, Solaiman Shokur

Freezing of Gait (FoG) is a common condition in patients with Parkinson's disease (PD). It often leads to falls, and it severely affects the patient's quality of life. Although the neural mechanism of FoG is not well-known, wearable sensorbased assistive s ...

IEEE2021

Decision Learning and Adaptation Over Multi-Task Networks

Ali H. Sayed

This paper studies the operation of multi-agent networks engaged in multi-task decision problems under the paradigm of simultaneous learning and adaptation. Two scenarios are considered:one in which a decision must be taken among multiple states of nature ...

IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC2021