Publications associées à Automated Reconstruction of Tree Structures using Path Classifiers and Mixed Integer Programming

Publications associées (31)

Quantifying the Unknown: Data-Driven Approaches and Applications in Energy Systems

In light of the challenges posed by climate change and the goals of the Paris Agreement, electricity generation is shifting to a more renewable and decentralized pattern, while the operation of systems like buildings is increasingly electrified. This calls ...

EPFL2024

Aggregating Spatial and Photometric Context for Photometric Stereo

David Honzátko

Photometric stereo, a computer vision technique for estimating the 3D shape of objects through images captured under varying illumination conditions, has been a topic of research for nearly four decades. In its general formulation, photometric stereo is an ...

EPFL2024

Results on Sparse Integer Programming and Geometric Independent Sets

Jana Tabea Cslovjecsek

An integer linear program is a problem of the form max{c^T x : Ax=b, x >= 0, x integer}, where A is in Z^(n x m), b in Z^m, and c in Z^n. Solving an integer linear program is NP-hard in general, but there are several assumptions for which it becomes fixed ...

EPFL2023

3D reconstruction of curvilinear one-dimensional objects viewed in transmission electron microscopy

Gulnaz Ganeeva

To obtain a more complete understanding of material microstructure at the nanoscale and to gain profound insights into their properties, there is a growing need for more efficient and precise methods that can streamline the process of 3D imaging using a tr ...

EPFL2023

Quantitative Methods for Omnichannel Decision-Making

Andrey Vasilyev

Omnichannel retail has emerged as the new standard in today's commerce landscape, with retailers integrating their physical and online channels to enhance the customer shopping experience. However, such integration presents significant challenges for retai ...

EPFL2023

Deep Learning for 3D Surface Modelling and Reconstruction

Benoît Alain René Guillard

In recent years, there has been a significant revolution in the field of deep learning, which has demonstrated its effectiveness in automatically capturing intricate patterns from large datasets. However, the majority of these successes in Computer Vision ...

EPFL2023

Automated neuron tracking inside moving and deforming C. elegans using deep learning and targeted augmentation

Ariane Andrée Marie Delrocq, Sahand Jamal Rahi

Reading out neuronal activity from three-dimensional (3D) functional imaging requires segmenting and tracking individual neurons. This is challenging in behaving animals if the brain moves and deforms. The traditional approach is to train a convolutional n ...

Nature Publishing Group2023

GRAMM: Fast CGRA Application Mapping Based on A Heuristic for Finding Graph Minors

Mirjana Stojilovic

A graph H is a minor of a second graph G if G can be transformed into H by two operations: 1) deleting nodes and/or edges, or 2) contracting edges. Coarse-grained reconfigurable array (CGRA) application mapping is closely related to the graph minor problem ...

Los Alamitos2023

Assortment optimization using an attraction model in an omnichannel environment

Ralf Seifert, Andrey Vasilyev, Sebastian Maier

Making assortment decisions is becoming an increasingly difficult task for many retailers worldwide as they implement omnichannel initiatives. Discrete choice modeling lies at the core of this challenge, yet existing models do not sufficiently account for ...

2023

Large-scale traffic signal control and multimodal network design

Dimitrios Tsitsokas

Traffic congestion constitutes one of the most frequent, yet challenging, problems to address in the urban space. Caused by the concentration of population, whose mobility needs surpass the serving capacity of urban networks, congestion cannot be resolved ...

EPFL2022

Removing Algorithmic Discrimination (With Minimal Individual Error)

Rachid Guerraoui, El Mahdi El Mhamdi, Alexandre David Olivier Maurer, Le Nguyen Hoang

We address for the first time the problem of correcting group discriminations within a score function, while minimizing the individual error. Each group is described by a probability density function on the set of profiles. We first solve the problem analy ...

2022

Robust Isometric Non-Rigid Structure-From-Motion

Shaifali Parashar

Non-Rigid Structure-from-Motion (NRSfM) reconstructs a deformable 3D object from keypoint correspondences established between monocular 2D images. Current NRSfM methods lack statistical robustness, which is the ability to cope with correspondence errors. T ...

IEEE COMPUTER SOC2022

From Trees to Barcodes and Back Again: A Combinatorial, Probabilistic and Geometric Study of a Topological Inverse Problem

Adélie Eliane Garin

In this thesis, we investigate the inverse problem of trees and barcodes from a combinatorial, geometric, probabilistic and statistical point of view. Computing the persistent homology of a merge tree yields a barcode B. Reconstructing a tree from B invol ...

EPFL2022

Weakly Supervised Volumetric Image Segmentation with Deformed Templates

Pascal Fua, Pamuditha Udaranga Wickramasinghe, Mian Akbar Shah

There are many approaches to weakly-supervised training of networks to segment 2D images. By contrast, existing approaches to segmenting volumetric images rely on full-supervision of a subset of 2D slices of the 3D volume. We propose an approach to volume ...

Springer2022

The double exponential runtime is tight for 2-stage stochastic ILPs

Kim-Manuel Klein, Alexandra Anna Lassota

We consider fundamental algorithmic number theoretic problems and their relation to a class of block structured Integer Linear Programs (ILPs) called 2-stage stochastic. A 2-stage stochastic ILP is an integer program of the form min{c(T)x vertical bar Ax = ...

SPRINGER HEIDELBERG2022

Digital twins for post-earthquake damage assessment of free-standing buildings including damage information

Katrin Beyer, Radhakrishna Achanta, Bryan German Pantoja Rosero, Amir Rezaie

We present a pipeline for the automatic generation of digital twins of free-standing buildings for damage assessment. Our method takes multiple view images of the target building as input and processes them to produce a 3D model in levels of detail (LOD) f ...

2022

Computational methods for live heart imaging with speed-constrained microscopes

Olivia Mariani

Imaging methods to capture the beating and developing heart inside embryonic animal models such as the zebrafish are a key component for the study of fundamental biological processes such as cardiac birth defects or tissue regeneration. However, live heart ...

EPFL2021

Computational tool for stock-constrained design of structures

Corentin Jean Dominique Fivet, Jan Friedrich Georg Brütting, Jonas Warmuth

Designing structures from reused elements is becoming an increasingly important design task for structural engineers as it has potential to significantly reduce adverse environmental impacts of building structures. To allow for a broad application of this ...

2021

Efficient Sequential and Parallel Algorithms for Multistage Stochastic Integer Programming Using Proximity

Friedrich Eisenbrand, Moritz Andreas Venzin, Jana Tabea Cslovjecsek

We consider the problem of solving integer programs of the form min {c^⊺ x : Ax = b, x ∈ ℤ_{⩾ 0}}, where A is a multistage stochastic matrix in the following sense: the primal treedepth of A is bounded by a parameter d, which means that the columns of A ca ...

Schloss Dagstuhl - Leibniz-Zentrum für Informatik2021

The ETFL formulation allows multi-omics integration in thermodynamics-compliant metabolism and expression models

Vassily Hatzimanikatis, Pierre Guy Rémy Salvy

Systems biology has long been interested in models capturing both metabolism and expression in a cell. We propose here an implementation of the metabolism and expression model formalism (ME-models), which we call ETFL, for Expression and Thermodynamics Flu ...

Nature Research2020