Current Practice in Software Development for Computational Neuroscience and How to Improve It

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With the upcoming generation of telescopes, cluster scale strong gravitational lenses will act as an increasingly relevant probe of cosmology and dark matter. The better resolved data produced by current and future facilities requires faster and more effic ...

Wannier90 is an open-source computer program for calculating maximally-localised Wannier functions (MLWFs) from a set of Bloch states. It is interfaced to many widely used electronic-structure codes thanks to its independence from the basis sets representi ...

The biophysical modeling efforts in diffusion MRI have grown considerably over the past 25 years. In this review, we dwell on the various challenges along the journey of bringing a biophysical model from initial design to clinical implementation, identifyi ...

We present an overview of the onetep program for linear-scaling density functional theory (DFT) calculations with large basis set (plane-wave) accuracy on parallel computers. The DFT energy is computed from the density matrix, which is constructed from spa ...

In this paper a hybrid framework is illustrated, with a software and hardware integration strategy, for an industrial platform that exploits features from a Relational Database (RDB) and Triplestore using the blackboard architectural pattern, ensuring effi ...

The main goals of this thesis pertain to the development of a device capable of detecting microorganism viability through monitoring the oscillations of a microscopic cantilever transducer, to improve the presently used device and to attempt to explain in ...

In this paper we introduce SD-WISE, a Software-Defined Wireless SEnsor networking solution for Wireless Sensor (and actuator) Networks (WSNs). SD-WISE has several unique features making it a flexible and expandable solution that can be applied in heterogen ...

For the first time, the JET operation in deuterium-tritium (D-T) plasma, which is scheduled to take place on JET in 2020, will be performed in the ITER mix of plasma-facing component materials. In view of the preparation of the DT campaign (DTE2), several ...

Program synthesis was first proposed a few decades ago, but in the last decade it has gained increased momentum in the research community. The increasing complexity of software has dictated the urgent need for improved supporting tools that verify the soft ...

With the widespread uptake of two-dimensional (2D) and three-dimensional (3D) single-molecule localization microscopy (SMLM), a large set of different data analysis packages have been developed to generate super-resolution images. In a large community effo ...

Digital transformation is one of the biggest phenomena of this decade. One enabler of this revolution was cloud computing. Today, software engineers can deliver software as a service (SaaS), which is accessible to users through the Internet. Slack, Shopify ...

Ongoing advances in imaging techniques create new demands regarding the analysis of images in medicine and biology. Image segmentation is a key step of many image analysis pipelines and its proper execution is a particularly challenging task. This thesis i ...

Current Practice in Software Development for Computational Neuroscience and How to Improve It

Chattez avec Graph Search

Lenstool-HPC: A High Performance Computing based mass modelling tool for cluster-scale gravitational lenses

Wannier90 as a community code: new features and applications

Challenges for biophysical modeling of microstructure

The ONETEP linear-scaling density functional theory program

A hybrid framework for industrial data storage and exploitation

Development of an AFM-based nanomotion detection device for microbiological samples

SD-WISE: A Software-Defined WIreless SEnsor network

The software and hardware architecture of the real-time protection of in-vessel components in JET-ILW

Scaling Functional Synthesis and Repair

Super-resolution fight club: assessment of 2D and 3D single-molecule localization microscopy software

A Digital Platform connecting Academia and Small Businesses: An opportunity for Knowledge Management Experiments

SUBDIVIDE AND CONQUER Active Contours and Surfaces for Biomedical Image Segmentation