Role of extra-polymeric substances (EPS) on the microbial activity in unsaturated porous media

À propos
Confidentialité
Mentions légales

Graph Chatbot

Publications associées (28)

The architecture of benthic biofilms - Linking hydraulics to spatially structured processes

Anna Depetris

Biofilms are spatially structured ecosystems, characterized by patterns and architectural features determined by the interplay between endogenous and exogenous processes. As in many other structured ecosystems, the characterization of spatial interactions ...

EPFL2021

The influence of the crowding assumptions in biofilm simulations

Vassily Hatzimanikatis, Liliana Angeles Martinez

Author summary In nature, many organisms grow in crowded biofilms that protect against stressful conditions, making their control/eradication a challenge. Modeling these microbial systems is a valuable tool for studying the interactions among cells and exp ...

2021

Spatio-temporal modeling of the crowding conditions and metabolic variability in microbial communities

Vassily Hatzimanikatis, Liliana Angeles Martinez

The metabolic capabilities of the species and the local environment shape the microbial interactions in a community either through the exchange of metabolic products or the competition for the resources. Cells are often arranged in close proximity to each ...

2021

Morphogenesis and oxygen dynamics in phototrophic biofilms growing across a gradient of hydraulic conditions

Amin Niayifar, Tom Ian Battin, Hannes Markus Peter, Anna Depetris, Michael Kühl

Biofilms are surface-attached and matrix-enclosed microbial communities that dominate microbial life in numerous ecosystems. Using flumes and automated optical coherence tomography, we studied the morphogenesis of phototrophic biofilms along a gradient of ...

2021

Energy efficiency and biological interactions define the core microbiome of deep oligotrophic groundwater

Rizlan Bernier-Latmani, Emma Bell

While oligotrophic deep groundwaters host active microbes attuned to the low-end of the bioenergetics spectrum, the ecological constraints on microbial niches in these ecosystems and their consequences for microbiome convergence are unknown. Here, we provi ...

Nature Research2021

Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation

Corey Alfred Stevens

Carbohydrate recognition by lectins governs critical host-microbe interactions. MpPA14 (Marinomonas primoryensis PA14 domain) lectin is a domain of a 1.5-MDa adhesin responsible for a symbiotic bacterium-diatom interaction in Antarctica. Here, we show that ...

Amer Soc Microbiology2021

Highly Variable and Non-complex Diazotroph Communities in Corals From Ambient and High CO2 Environments

Nils Rädecker, Gabriela Hannah Holligan Perna

The ecological success of corals depends on their association with microalgae and a diverse bacterial assemblage. Ocean acidification (OA), among other stressors, threatens to impair host-microbial metabolic interactions that underlie coral holobiont funct ...

FRONTIERS MEDIA SA2021

Evaluating Alternative Metacommunity Hypotheses for Diatoms in the McMurdo Dry Valleys Using Simulations and Remote Sensing Data

Tyler Joe Kohler

Diatoms are diverse and widespread freshwater Eukaryotes that make excellent microbial subjects for addressing questions in metacommunity ecology. In the McMurdo Dry Valleys of Antarctica, the simple trophic structure of glacier-fed streams provides an ide ...

2020

Page 2 sur 2