Publications associées à Shape Refinement through Explicit Heap Analysis

Automated Formal Verification of Software Network Functions

Formally verifying the correctness of software is necessary to merit the trust people put in software systems. Currently, formal verification requires human effort to prove that a piece of code matches its specification and code changes to improve verifiab ...

EPFL2024

Orchestrating chromosome conformation capture analysis with Bioconductor

Cyril Matthey-Doret

Genome-wide chromatin conformation capture assays provide formidable insights into the spatial organization of genomes. However, due to the complexity of the data structure, their integration in multi-omics workflows remains challenging. We present data st ...

Nature Research2024

Transportation-based functional ANOVA and PCA for covariance operators

Victor Panaretos, Yoav Zemel, Valentina Masarotto

We consider the problem of comparing several samples of stochastic processes with respect to their second-order structure, and describing the main modes of variation in this second order structure, if present. These tasks can be seen as an Analysis of Vari ...

Inst Mathematical Statistics-Ims2024

Capturing Types

Martin Odersky, Ondrej Lhoták, Aleksander Slawomir Boruch-Gruszecki

Type systems usually characterize the shape of values but not their free variables. However, many desirable safety properties could be guaranteed if one knew the free variables captured by values. We describe CC

Assoc Computing Machinery2023

MultiModN- Multimodal, Multi-Task, Interpretable Modular Networks

Mary-Anne Hartley, Thijs Vogels, Thierry Bossy, Martin Jaggi, Tanja Christina Käser Jacober, Vinitra Swamy, Malika Satayeva, Jibril Albachir Frej

Predicting multiple real-world tasks in a single model often requires a particularly diverse feature space. Multimodal (MM) models aim to extract the synergistic predictive potential of multiple data types to create a shared feature space with aligned sema ...

2023

Privacy-Preserving Machine Learning on Graphs

Sina Sajadmanesh

Graph Neural Networks (GNNs) have emerged as a powerful tool for learning on graphs, demonstrating exceptional performance in various domains. However, as GNNs become increasingly popular, new challenges arise. One of the most pressing is the need to ensur ...

EPFL2023

Fast correlation function calculator A high-performance pair-counting toolkit

Cheng Zhao

Context. A novel high-performance exact pair-counting toolkit called fast correlation function calculator (FCFC) is presented.Aims. With the rapid growth of modern cosmological datasets, the evaluation of correlation functions with observational and simula ...

EDP SCIENCES S A2023

CellCharter reveals spatial cell niches associated with tissue remodeling and cell plasticity

Albert Santamaria Martinez, Giovanni Ciriello, Daniele Tavernari

Tissues are organized in cellular niches, the composition and interactions of which can be investigated using spatial omics technologies. However, systematic analyses of tissue composition are challenged by the scale and diversity of the data. Here we pres ...

Nature Portfolio2023

Automated Verification of Network Function Binaries

George Candea, Aikaterini Argyraki, Solal Vincenzo Pirelli

Formally verifying the correctness of software network functions (NFs) is necessary for network reliability, yet existing techniques require full source code and mandate the use of specific data structures. We describe an automated technique to verify NF b ...

USENIX Association2022

Scaling Language Features for Program Verification

Georg Stefan Schmid

Formal verification of real-world software systems remains challenging for a number of reasons, including lack of automation, friction in specifying properties, and limited support for the diverse programming paradigms used in industry. In this thesis we m ...

EPFL2022

Sketches, metrics and fast algorithms

Navid Nouri

As it has become easier and cheaper to collect big datasets in the last few decades, designing efficient and low-cost algorithms for these datasets has attracted unprecedented attention. However, in most applications, even storing datasets as acquired has ...

EPFL2022

Preprocessing Antarctic Weather Station (AWS) data in python

Michael Lehning, Franziska Gerber

There are many sources providing atmospheric weather station data for the Antarctic continent. However, variable naming, timestamps and data types are highly variable between the different sources. The published python code intends to make processing of di ...

Zenodo2022

Extraction and controlled functionalization of lignin for materials applications

Stefania Bertella

Lignin is a renewable aromatic polymer that due to its abundance and unique chemical structure is a promising candidate to replace aromatic materials that are currently sourced from fossil oil. The same structure of lignin poses however drawbacks for its v ...

EPFL2022

Virtual ADTs for Portable Metaprogramming

Martin Odersky, Nicolas Alexander Stucki

Scala 3 provides a metaprogramming interface that represents the abstract syntax tree definitions using algebraic data types. To allow the compiler to freely evolve without breaking the metaprogramming interface, we present virtual algebraic data types (or ...

ASSOC COMPUTING MACHINERY2021

Benchmarking of objective quality metrics for point cloud compression

Touradj Ebrahimi, Evangelos Alexiou, Davi Nachtigall Lazzarotto

Point cloud is a promising imaging modality for the representation of 3D media. The vast volume of data associated with it requires efficient compression solutions, with lossy algorithms leading to larger bit-rate savings at the expense of visual impairmen ...

IEEE2021

Software Support for Non-Volatile Memory (NVM) Programming

David Teksen Aksun

Non-Volatile Memory (NVM) is an emerging type of memory device that provides fast, byte-addressable, and high-capacity durable storage. NVM sits on the memory bus and allows durable data structures designs similar to the in-memory equivalent ones. Expensiv ...

EPFL2021

Perceptual Quality of Point Clouds with application to Compression

Evangelos Alexiou

Modern information technologies and human-centric communication systems employ advanced content representations for richer portrayals of the real world. The newly adopted imaging modalities offer additional information cues and permit the depiction of real ...

EPFL2021

Using an antenna as a tool for studying microturbulence and zonal structures in tokamaks with a global gyrokinetic GPU-enabled particle-in-cell code

Noé Thomas Elie Ohana

In order to get a better understanding of the interaction of plasma microinstabilities and associated turbulence with specific modes, an antenna is implemented in the global gyrokinetic Particle-In-Cell (PIC) code ORB5. It consists in applying an external ...

EPFL2020

Verification of Software Network Functions with No Verification Expertise

Arseniy Zaostrovnykh

Software network functions (NFs), such as a network address translator, load balancer, or proxy, promise to bring flexibility and rapid innovation to computer networks and to reduce operational costs. However, continuous updates and flexibility typically c ...

EPFL2020

Contact networks across ages: computational analysis of epidemiological dynamics

Gianrocco Lazzari

For decades mathematical modeling in epidemiology has helped understanding the dynamics of infectious diseases, as well as describe possible intervention scenarios to prevent and control them. However, such models were relying on several assumptions, such ...

EPFL2020