Publications associées à Fast and automatic processing of multi-level events in nanopore translocation experiments

Publications associées (34)

Vehicle Trajectory Dataset from Drone-Collected Data at Three Swiss Roundabouts

Nikolaos Geroliminis, Emmanouil Barmpounakis, Robert Fonod, Jasso Espadaler Clapés

Overview This dataset provides high-resolution, georeferenced vehicle trajectories collected via drone footage at three roundabouts located in the municipalities of Frick and Laufenburg, Canton of Aargau, Switzerland. The data were collected as part of a ...

Zenodo2025

Adaptive Recursive Query Optimization

Anastasia Ailamaki, Martin Odersky, Guillaume André Fradji Martres, Anna Patricia Herlihy

Performance-critical industrial applications, including large-scale program, network, and distributed system analyses, are increasingly reliant on recursive queries for data analysis. Yet traditional relational algebra-based query optimization techniques d ...

IEEE2024

Combined Passive and Active Ultrasonic Stress Wave Monitoring of Concrete Structures: An Overview of Data Analysis Techniques and Their Applications and Limitations

Eugen Brühwiler, Numa Joy Bertola

Combined passive ultrasonic (US) stress wave [better known as acoustic emission (AE)] and active US stress wave monitoring has been shown to provide a more holistic picture of ongoing fracture processes, damage progression, as well as slowly occurring agin ...

NDT.net2024

The stability of deep learning for 21cm foreground removal across various sky models and frequency-dependent systematics

Te Chen, Jean-Paul Richard Kneib, Daniel Felipe Forero Sanchez, Emma Elizabeth Tolley, Michele Bianco

Deep learning (DL) has recently been proposed as a novel approach for 21cm foreground removal. Before applying DL to real observations, it is essential to assess its consistency with established methods, its performance across various simulation models, an ...

2024

DAI: How Pre-computation Speeds up Data Analysis

Kira Isabel Duwe

As data sizes continue to expand, the challenge of conducting meaningful analysis grows. Utilizing I/O (Input/Output) libraries, such as HDF5 (Hierarchical Data Format) and ADIOS2 (Adaptable IO System), facilitates the filtering of raw data, with prior res ...

Springer Science and Business Media Deutschland GmbH2024

Machine learning method for the classification of the state of living organisms' oscillations

Sandor Kasas, María Inés Villalba

The World Health Organization highlights the urgent need to address the global threat posed by antibiotic-resistant bacteria. Efficient and rapid detection of bacterial response to antibiotics and their virulence state is crucial for the effective treatmen ...

Frontiers Media Sa2024

ZigZag: Universal Sampling-free Uncertainty Estimation Through Two-Step Inference

Minh Hieu Lê, Nikita Durasov

Whereas the ability of deep networks to produce useful predictions on many kinds of data has been amply demonstrated, estimating the reliability of these predictions remains challenging. Sampling approaches such as MC-Dropout and Deep Ensembles have emerge ...

2024

Spectral Estimators for High-Dimensional Matrix Inference

Farzad Pourkamali

A key challenge across many disciplines is to extract meaningful information from data which is often obscured by noise. These datasets are typically represented as large matrices. Given the current trend of ever-increasing data volumes, with datasets grow ...

EPFL2024

SIMPLE HIERARCHICAL PLANNING WITH DIFFUSION

Caglar Gulcehre

Diffusion-based generative methods have proven effective in modeling trajectories with offline datasets. However, they often face computational challenges and can falter in generalization, especially in capturing temporal abstractions for long- horizon tas ...

2024

A Reduced Order Model for Domain Decompositions with Non-conforming Interfaces

Alfio Quarteroni, Andrea Manzoni

In this paper, we propose a reduced-order modeling strategy for two-way Dirichlet-Neumann parametric coupled problems solved with domain-decomposition (DD) sub-structuring methods. We split the original coupled differential problem into two sub-problems wi ...

Springer/Plenum Publishers2024

Micropreparative Gel Electrophoresis for Purification of Nanoscale Bioconjugates

Ardemis Anoush Boghossian, Yahya Rabbani, Shang-Jung Wu, Vitalijs Zubkovs, Sayyed Hashem Sajjadi

Conventional techniques for purifying macromolecular conjugates often require complex and costly installments that are inaccessible to most laboratories. In this work, we develop a one-step micropreparative method based on a trilayered polyacrylamide gel e ...

2024

Efficient Continual Finite-Sum Minimization

Ioannis Mavrothalassitis, Volkan Cevher, Leello Tadesse Dadi, Efstratios Panteleimon Skoulakis

Given a sequence of functions

f_1,\ldots,f_n

with

f_i:\mathcal{D}\mapsto \mathbb{R}

, finite-sum minimization seeks a point

{x}^\star \in \mathcal{D}

minimizing

\sum_{j=1}^nf_j(x)/n

. In this work, we propose a key twist into the finite-sum minimizat ...

2024

High-order geometric integrators for the variational Gaussian wavepacket dynamics and application to vibronic spectra at finite temperature

Roya Moghaddasi Fereidani

Molecular quantum dynamics simulations are essential for understanding many fundamental phenomena in physics and chemistry. They often require solving the time-dependent Schrödinger equation for molecular nuclei, which is challenging even for medium-sized ...

EPFL2024

Quantifying the Unknown: Data-Driven Approaches and Applications in Energy Systems

Paul Scharnhorst

In light of the challenges posed by climate change and the goals of the Paris Agreement, electricity generation is shifting to a more renewable and decentralized pattern, while the operation of systems like buildings is increasingly electrified. This calls ...

EPFL2024

Residual-based attention in physics-informed neural networks

Nikolaos Stergiopoulos, Sokratis Anagnostopoulos

Driven by the need for more efficient and seamless integration of physical models and data, physics -informed neural networks (PINNs) have seen a surge of interest in recent years. However, ensuring the reliability of their convergence and accuracy remains ...

Elsevier Science Sa2024

Iterative removal of sources to model the turbulent electromotive force

Salim Bennouna, Abhijit Bhausaheb Bendre

We describe a novel method to compute the components of dynamo tensors from direct magnetohydrodynamic (MHD) simulations. Our method relies upon an extension and generalization of the standard H & ouml;gbom CLEAN algorithm widely used in radio astronomy to ...

Oxford Univ Press2024

Method of preparation of amyloidogenic protein aggregates and uses thereof

Hilal Lashuel, Galina Limorenko

The invention relates to methods for the preparation of method of preparation of Tau aggregates, including fibrils, fibrillar species, soluble and insoluble oligomeric species, new Tau aggregates and uses thereof. The invention further relates to the uses ...

2024

Towards a real-time capable hybrid-twin for gas-bearing supported high-speed turbocompressors

Jürg Alexander Schiffmann, Luis Eric Olmedo Ocampo

A hybrid-twin for gas-bearing supported, high-speed turbocompressor is suggested to be an aide to increase the operational reliability and to provide valuable insights to improve its design. The bearing clearances of a few micrometers imply that excessive ...

2023

Contextual Stochastic Bilevel Optimization

Daniel Kuhn, Andreas Krause, Yifan Hu

We introduce contextual stochastic bilevel optimization (CSBO) -- a stochastic bilevel optimization framework with the lower-level problem minimizing an expectation conditioned on some contextual information and the upper-level decision variable. This fram ...

2023

An Unbiased Method of Measuring the Ratio of Two Data Sets

Jean-Paul Richard Kneib, Huanyuan Shan

In certain cases of astronomical data analysis, the meaningful physical quantity to extract is the ratio R between two data sets. Examples include the lensing ratio, the interloper rate in spectroscopic redshift samples, and the decay rate of gravitational ...

IOP Publishing Ltd2023