Publications associées à Combined Earth observations reveal the sequence of conditions leading to a large algal bloom in Lake Geneva

Dangerous acquaintances: the interplay between type IV pili and the type VI secretion system during Vibrio cholerae's environmental lifestyle

Cholera, caused by the bacterium Vibrio cholerae, has affected humanity throughout history and still impacts millions of people every year. Apart from being a human pathogen, V. cholerae is a common member of the aquatic environment. Due to this natural re ...

EPFL2024

The cost of adaptability: resource availability constrains functional stability under pulsed disturbances

Hannes Markus Peter

Global change exposes ecosystems to changes in the frequency, magnitude, and concomitancy of disturbances, which impact the composition and functioning of these systems. Here, we experimentally evaluate the effects of salinity disturbances and eutrophicati ...

Amer Soc Microbiology2024

Disentangling the effects of climate change and reoligotrophication on primary production in a large lake

Alfred Johny Wüest, Emile Barbe, Hugo Nicolás Ulloa Sánchez, Shubham Krishna

Climate change and reduction in nutrient loads have significant effects on primary production and phytoplankton growth dynamics. Since in the last few decades in many regions, nutrients in lakes were reduced simultaneously as the climate changed. Yet, it r ...

SPRINGER BASEL AG2023

Vertical distribution and seasonal dynamics of planktonic cyanobacteria communities in a water column of deep mesotrophic Lake Geneva

Natacha Tofield-Pasche, Stéphane Joost, Tamar Kohn, Charlotte Gisèle Weil, Oliver Michele Selmoni, Anna Carratala Ripolles, Coralie Chappelier, Hannah Elisa Chmiel, Annie Sandrine Guillaume

Background: Temperate subalpine lakes recovering from eutrophication in central Europe are experiencing harmful blooms due to the proliferation of Planktothrix rubescens, a potentially toxic cyanobacteria. To optimize the management of cyanobacteria blooms ...

Frontiers Media SA2023

Unraveling submesoscale processes associated with meso- and basin-scale gyres in Lake Geneva

Seyed Mahmood Hamze Ziabari

In large lakes, basin-scale gyres and submesoscale eddies, i.e., rotating coherent water masses, play a key role in spreading biochemical materials and energy throughout the basin, thereby significantly impacting water quality. Due to their transient and s ...

EPFL2023

Improving algal bloom detection using spectroscopic analysis and machine learning: A case study in a large artificial reservoir, South Korea

Trung-Dung Hoang, Thanh Trung Huynh

The prediction of algal blooms using traditional water quality indicators is expensive, labor-intensive, and timeconsuming, making it challenging to meet the critical requirement of timely monitoring for prompt management. Using optical measures for foreca ...

ELSEVIER2023

Controlling factors of phytoplankton distribution in the river–lake transition zone of a large lake

David Andrew Barry, Matthieu Fallet, Frédéric Charles Soulignac

River–lake transition zones have been identified as major drivers of phytoplankton growth. With climate change reducing the frequency of complete lake overturns, it is expected that the Rhône River, the main tributary to Lake Geneva (France/Switzerland), w ...

2023

Chimney‐Like Intense Pelagic Upwelling in the Center of Basin‐Scale Cyclonic Gyres in Large Lake Geneva

Ulrich Lemmin, David Andrew Barry, Rafael Sebastian Reiss, Mehrshad Foroughan, Seyed Mahmood Hamze Ziabari

Basin-scale quasi-geostrophic gyres are common features of large lakes subject to Coriolis force. Cyclonic gyres are often characterized by dome-shaped thermoclines that form due to pelagic upwelling that takes place in their center. At present, the dynami ...

2023

Coupled carbon and nitrogen cycling regulates the cnidarian–algal symbiosis

Anders Meibom, Stéphane Laurent Escrig, Nils Rädecker

Efficient nutrient recycling underpins the ecological success of cnidarian-algal symbioses in oligotrophic waters. In these symbioses, nitrogen limitation restricts the growth of algal endosymbionts in hospite and stimulates their release of photosynthates ...

Nature Research2023

The biofilm ecology of proglacial floodplain streams

Jade Brandani

Glacial forelands figure among the most dynamic landscapes on Earth, and their formation is currently accelerating given glacier shrinkage. Draining these forelands are streams hosting unique microbial communities, which have the capacity to impact both th ...

EPFL2023

Symbiotic nutrient cycling enables the long-term survival of Aiptasia in the absence of heterotrophic food sources

Anders Meibom, Nils Rädecker

Phototrophic Cnidaria are mixotrophic organisms that can complement their het- erotrophic diet with nutrients assimilated by their algal endosymbionts. Metabolic mod- els suggest that the translocation of photosynthates and their derivatives from the algae ...

2023

Iron Reduction in Profundal Sediments of Ultraoligotrophic Lake Tahoe under Oxygen-Limited Conditions

Meret Aeppli

Increased periods of bottom water anoxia in deep temperate lakes due to decreasing frequency and depth of water column mixing in a warming climate may result in the reductive dissolution of iron minerals and increased flux of nutrients from the sediment in ...

2023

An evaluation of new particle formation events in Helsinki during a Baltic Sea cyanobacterial summer bloom

Marjan Marbouti, Lubna Dada

Several studies have investigated new particle formation (NPF) events from various sites ranging from pristine locations, including forest sites, to urban areas. However, there is still a dearth of studies investigating NPF processes and subsequent aerosol ...

Copernicus GmbH2022

Detecting submesoscale cold filaments in a basin-scale gyre in large, deep Lake Geneva (Switzerland/France)

Ulrich Lemmin, David Andrew Barry, Amir Mehdi Razmi, Seyed Mahmood Hamze Ziabari

Submesoscale filaments are a well-documented feature of oceanic flow fields. Based on the analysis of high-resolution 3D numerical simulations, field observations and remote sensing imagery, this study, carried out in Lake Geneva, Western Europe's largest ...

2022

Glacier shrinkage will accelerate downstream decomposition of organic matter and alters microbiome structure and function

Nicola Deluigi, Leïla Ezzat, Vincent Henri De Staercke, Tom Ian Battin, Paraskevi Pramateftaki, Hannes Markus Peter, Jade Brandani, Matteo Tolosano, Michail Styllas, Tyler Joe Kohler, Stylianos Fodelianakis, Massimo Bourquin, Martina Andrea Schön, Susheel Bhanu Busi, Grégoire Marie Octave Edouard Michoud

The shrinking of glaciers is among the most iconic consequences of climate change. Despite this, the downstream consequences for ecosystem processes and related microbiome structure and function remain poorly understood. Here, using a space-for-time substi ...

Wiley2022

Basin-scale gyres and mesoscale eddies in large lakes: A novel procedure for their detection and characterization, assessed in Lake Geneva

Ulrich Lemmin, David Andrew Barry, Mehrshad Foroughan, Frédéric Charles Soulignac, Seyed Mahmood Hamze Ziabari

In large lakes subject to the Coriolis force, basin-scale gyres and mesoscale eddies, i.e. rotating coherent water masses, play a key role in spreading biochemical materials and energy throughout the lake. In order to assess the spatial and temporal extent ...

2022

Nutrient Availability Does Not Affect Community Assembly in Root-Associated Fungi but Determines Fungal Effects on Plant Growth

Florian Frédéric Vincent Breider, Bing Bai

Nonmycorrhizal root-colonizing fungi are key determinants of plant growth, driving processes ranging from pathogenesis to stress alleviation. Evidence suggests that they might also facilitate host access to soil nutrients in a mycorrhiza-like manner, but t ...

2022

Monitoring Mesoscale to Submesoscale Processes in Large Lakes with Sentinel-1 SAR Imagery: The Case of Lake Geneva

Ulrich Lemmin, David Andrew Barry, Mehrshad Foroughan, Seyed Mahmood Hamze Ziabari

As in oceans, large-scale coherent circulations such as gyres and eddies are ubiquitous features in large lakes that are subject to the Coriolis force. They play a crucial role in the horizontal and vertical distribution of biological, chemical and physica ...

2022

High-throughput Microfluidic Platforms for S. cerevisiae Single Cell Studies

Hon Ming Andrew Yip

Cells consume extra-cellular nutrients and resources to maintain cellular fitness. Extra-cellular conditions vary over time. Cellular programs encoded in genes adjust to adapt to the environments. Gene regulatory networks (GRNs) have evolved to be responsi ...

EPFL2022

Presence of algal symbionts affects denitrifying bacterial communities in the sea anemone Aiptasia coral model

Anders Meibom, Nils Rädecker, Claudia Isabella Pogoreutz

The coral-algal symbiosis is maintained by a constant and limited nitrogen availability in the holobiont. Denitrifiers, i.e., prokaryotes reducing nitrate/nitrite to dinitrogen, could contribute to maintaining the nitrogen limitation in the coral holobiont ...

2022