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Erick Jorge Canales Rodriguez

Cette personne a quitté l’EPFL

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Publications associées (59)

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Pore size estimation in axon-mimicking microfibers with diffusion-relaxation MRI

Jean-Philippe Thiran, Erick Jorge Canales Rodriguez, Muhamed Barakovic, Marco Pizzolato

Purpose: This study aims to evaluate two distinct approaches for fiber radius estimation using diffusion-relaxation MRI data acquired in biomimetic microfiber phantoms that mimic hollow axons. The methods considered are the spherical mean power-law approac ...

Wiley2024

In-Silico Trained AI for Enhanced T2Spectrum Imaging and Myelin Water Fraction Mapping in Preclinical 7T MRI

Jean-Philippe Thiran, Erick Jorge Canales Rodriguez, Thomas Yu

This study introduces a Machine Learning (ML) approach for estimating the T2 spectrum and myelin water fraction (MWF) using multi-echo T2 (MET2) data from preclinical 7T Magnetic Resonance Imaging (MRI) scanners. ML methods have shown promise in MWF estima ...

IEEE Computer Society2024

DWI Simulation-Assisted Machine Learning Models for Microstructure Estimation

Jean-Philippe Thiran, Gabriel Girard, Erick Jorge Canales Rodriguez, Muhamed Barakovic, Marco Pizzolato, Jonathan Rafael Patino Lopez, Thomas Yu

Diffusion MRI (DW-MRI) allows for the detailed exploration of the brain white matter microstructure, with applications in both research and the clinic. However, state-of-the-art methods for microstructure estimation suffer from known limitations, such as t ...

Springer Nature2020

Accelerated Microstructure Imaging via Convex Optimization (AMICO) in crossing fibers

Jean-Philippe Thiran, Alessandro Daducci, Yves Wiaux, Erick Jorge Canales Rodriguez, Anna Auria Rasclosa

Mapping the local microstructure properties of the tissue in the brain is crucial to understand any pathological condition from a biological perspective. In recent years, microstructure-imaging techniques aimed at extracting such precious information by us ...

2015

Robust Biophysical Parameter Estimation with a Neural Network Enhanced Hamiltonian Markov Chain Monte Carlo Sampler

Jean-Philippe Thiran, Erick Jorge Canales Rodriguez, Gabriel Girard, Marco Pizzolato, Jonathan Rafael Patino Lopez, Thomas Yu

Probabilistic parameter estimation in model fitting runs the gamut from maximum likelihood or maximum a posteriori point estimates from optimization to Markov Chain Monte Carlo (MCMC) sampling. The latter, while more computationally intensive, generally pr ...

SPRINGER INTERNATIONAL PUBLISHING AG2019

NRN1 epistasis with BDNF and CACNA1C: mediation effects on symptom severity through neuroanatomical changes in schizophrenia

Erick Jorge Canales Rodriguez

The expression of Neuritin-1 (NRN1), a neurotrophic factor crucial for neurodevelopment and synaptic plasticity, is enhanced by the Brain Derived Neurotrophic Factor (BDNF). Although the receptor of NRN1 remains unclear, it is suggested that NRN1's activat ...

Heidelberg2024

Partial-volume modeling reveals reduced gray matter in specific thalamic nuclei early in the time course of psychosis and chronic schizophrenia

Meritxell Bach Cuadra, Patric Hagmann, Erick Jorge Canales Rodriguez

The structural complexity of the thalamus, due to its mixed composition of gray and white matter, make it challenging to disjoint and quantify each tissue contribution to the thalamic anatomy. This work promotes the use of partial-volume-based over probabi ...

Wiley2020

Brain structural and functional substrates of ADGRL3 (latrophilin 3) haplotype in attention-deficit/hyperactivity disorder

Erick Jorge Canales Rodriguez

Previous studies have shown that the gene encoding the adhesion G protein-coupled receptor L3 (ADGRL3; formerly latrophilin 3, LPHN3) is associated with Attention-Deficit/Hyperactivity Disorder (ADHD). Conversely, no studies have investigated the anatomica ...

Nature Research2021

Quantitative Evaluation of Enhanced Multi-plane Clinical Fetal Diffusion MRI with a Crossing-Fiber Phantom

Meritxell Bach Cuadra, Gabriel Girard, Erick Jorge Canales Rodriguez, Marco Pizzolato

Diffusion Magnetic Resonance Imaging (dMRI) has become widely used to study in vivo white matter tissue properties noninvasively. However, fetal dMRI is greatly limited in Signal-to-Noise ratio and spatial resolution. Due to the uncontrollable fetal motion ...

SPRINGER INTERNATIONAL PUBLISHING AG2021

Age- and gender-related differences in brain tissue microstructure revealed by multi-component T2 relaxometry

Erick Jorge Canales Rodriguez

In spite of extensive work, inconsistent findings and lack of specificity in most neuroimaging techniques used to examine age- and gender-related patterns in brain tissue microstructure indicate the need for additional research. Here, we performed the larg ...

2021

Fast and robust estimation of NODDI parameters using non-Gaussian noise models and spatial regularization

Jean-Philippe Thiran, Alessandro Daducci, Erick Jorge Canales Rodriguez

In this study, we developed a robust inversion algorithm to estimate the Neurite Orientation Dispersion and Density Imaging (NODDI) model. It is based on the Accelerated Microstructure Imaging via Convex Optimization (AMICO) framework. However, in contrast ...

2018

Through-Plane Super-Resolution With Autoencoders in Diffusion Magnetic Resonance Imaging of the Developing Human Brain

Meritxell Bach Cuadra, Erick Jorge Canales Rodriguez, Gabriel Girard

Fetal brain diffusion magnetic resonance images (MRI) are often acquired with a lower through-plane than in-plane resolution. This anisotropy is often overcome by classical upsampling methods such as linear or cubic interpolation. In this work, we employ a ...

FRONTIERS MEDIA SA2022

What we learn about bipolar disorder from large-scale neuroimaging: Findings and future directions from theENIGMABipolar Disorder Working Group

Erick Jorge Canales Rodriguez, Jorge Miguel Dias Almeida Rodrigues Soares

MRI-derived brain measures offer a link between genes, the environment and behavior and have been widely studied in bipolar disorder (BD). However, many neuroimaging studies of BD have been underpowered, leading to varied results and uncertainty regarding ...

Wiley2022

Slice Estimation in Diffusion MRI of Neonatal and Fetal Brains in Image and Spherical Harmonics Domains Using Autoencoders

Meritxell Bach Cuadra, Gabriel Girard, Erick Jorge Canales Rodriguez, Thomas Yu

Diffusion MRI (dMRI) of the developing brain can provide valuable insights into the white matter development. However, slice thickness in fetal dMRI is typically high (i.e., 3-5 mm) to freeze the in-plane motion, which reduces the sensitivity of the dMRI s ...

SPRINGER INTERNATIONAL PUBLISHING AG2022

Estimating axon radius using diffusion-relaxation MRI: calibrating a surface-based relaxation model with histology

Jean-Philippe Thiran, Erick Jorge Canales Rodriguez, Muhamed Barakovic

Axon radius is a potential biomarker for brain diseases and a crucial tissue microstructure parameter that determines the speed of action potentials. Diffusion MRI (dMRI) allows non-invasive estimation of axon radius, but accurately estimating the radius o ...

FRONTIERS MEDIA SA2023

Spatial Prior Informed Constrained Spherical Deconvolution in Super Resolution Variation

Ekin Taskin, Jean-Philippe Thiran, Gabriel Girard, Erick Jorge Canales Rodriguez, Juan Luis Villarreal Haro

Constrained Spherical Deconvolution (CSD) is a state-of-the-art technique for unraveling complex fiber configurations of white matter from diffusion MRI data. Despite its ability to identify multiple fiber orientations, it faces difficulties in resolving f ...

Springer Nature2024

Sparse wars: A survey and comparative study of spherical deconvolution algorithms for diffusion MRI

Jean-Philippe Thiran, Erick Jorge Canales Rodriguez, Gabriel Girard, David Paul Roger Romascano, Jonathan Rafael Patino Lopez, Alessandro Daducci, Muhamed Barakovic, Marco Pizzolato, Gaëtan Olivier D Rensonnet

Spherical deconvolution methods are widely used to estimate the brain's white-matter fiber orientations from diffusion MRI data. In this study, eight spherical deconvolution algorithms were implemented and evaluated. These included two model selection tech ...

2019

Human-specific evolutionary markers linked to foetal neurodevelopment modulate brain surface area in schizophrenia

Erick Jorge Canales Rodriguez

Schizophrenia may represent a trade-off in the evolution of human-specific ontogenetic mechanisms that guide neurodevelopment. Human Accelerated Regions (HARs) are evolutionary markers functioning as neurodevelopmental transcription enhancers that have bee ...

2023

Improved estimation of the risk of manic relapse by combining clinical and brain scan data

Erick Jorge Canales Rodriguez

Introduction: Estimating the risk of manic relapse could help the psychiatrist individually adjust the treatment to the risk. Some authors have attempted to estimate this risk from baseline clinical data. Still, no studies have assessed whether the estimat ...

2023

Comparison of non-parametric T2 relaxometry methods for myelin water quantification

Jean-Philippe Thiran, Tobias Kober, Alessandro Daducci, Tom Hilbert, Erick Jorge Canales Rodriguez, Nicolas Kunz, Marco Pizzolato, Gian Franco Piredda, Thomas Yu

Multi-component T2 relaxometry allows probing tissue microstructure by assessing compartment-specific T2 relaxation times and water fractions, including the myelin water fraction. Non-negative least squares (NNLS) with zero-order Tikhonov regularization is ...

2021