Andrea AblasserEnseignement et PhD Doctorant·es actuel·les Ekaterina Gorbacheva, Iris Arianna Dorschel, Tieliang Gan, Yu Meng A dirigé les thèses EPFL de Simone Margret Haag, Sélène Glück, Marilena Wischnewski, Sophie Rivara, Natasha Samson Cours Immunology - advances and therapeutic implications BIO-479 Les étudiants acquièrent des connaissances de niveau avancé sur le fonctionnement du système immunitaire (vertébré). L'accent est mis sur les mécanismes moléculaires qui déterminent les réponses immunita
Bruno Emanuel Ferreira De Sousa CorreiaThroughout my PhD and postdoctoral studies I was trained in world-renowned laboratories and institutions in the United States of America (University of Washington and The Scripps Research Institute). Very early in my scientific career I found out my fascination about protein structure and function. My PhD studies evolved in the direction of immunogen design and vaccine engineering which sparked my interest in the many needs and opportunities in vaccinology and translational research. My efforts resulted in an enlightening piece of work where for the first time, computationally designed immunogens elicited potent neutralizing antibodies. During my postdoctoral studies I joined a chemical biology laboratory at the Scripps Research Institute. In this stage I developed novel chemoproteomics methods for the identification of protein-small molecule interaction sites in complex proteomes. In March 2015, I joined the École Polytechnique Fédérale de Lausanne (EPFL) – Switzerland as a tenure track assistant professor. The focus of my research group is to develop computational tools for protein design with particular emphasis in applying these strategies to immunoengineering (e.g. vaccine and cancer immunotherapy). The activities in my laboratory focus on computational design methods development and experimental characterization of the designed proteins. Our laboratory has been awarded with 2 prestigious research grants from the European Research Council. Lastly, I have been awarded the prize for best teacher of Life sciences in 2019.
Elisa OricchioEnseignement et PhD Doctorant·es actuel·les Vamsi Krishna Polavarapu, Asli Ece Kasapoglu, Konstantina Georgakopoulou, Eleni Balli A dirigé les thèses EPFL de Maria Christine Donaldson, Elena Battistello, Daniel Pereira Duarte, Frédérica Schyrr, Ruxandra-Andreea Lambuta, Aaron Simone Petruzzella, Jixing Zhong, Justine Epiney Cours Cancer biology I BIO-471 Le cours couvre les mécanismes moléculaires du développement du cancer: le cycle cellulaire; la stabilité du génome; les oncogènes; les g
Hannes Markus PeterEnseignement et PhD Doctorant·es actuel·les Zhe Liu, Aleksei Dukat, Martin Boutroux, Jingyi Hou, Léa Francomme, Stefan Eckensperger, Lisa Theis A co-dirigé les thèses EPFL de David Scheidweiler, Anna Depetris, Jade Brandani, David Touchette Cours Hidden rivers PENS-219 Hidden Rivers vise à répondre au besoin d'une compréhension interdisciplinaire des problématiques liées aux cours d'eau urbains, à travers les relations écologiques, hydrologiques et spatiales que l'on retrouve dans les pays
Romain GuietExpertise
Development of BioImage Analysis workflows and algorithms to extract quantitative data from microscopy images.BioSample Preparation : in vitro cell, organoid, time-lapse, fixation, staining strategies, actin, mitochondria, fluorescent protein expressionBioImage Acquisition : Widefield, Confocal, Whole Slide Imaging, Super-resolution (SIM, STORM, STED), FRET, FRAP, FLIMBioImage Analysis: Colocalisation analysis, Deconvolution, Time-lapse , Whole Slide ImagingTools & Software: ImageJ/Fiji, QuPath, i
Maria Josefina Marcaida LopezExpertise
Protein crystallographyProtein-nucleic acid complexesKinase-small molecule interactions
FELLOWSHIPS & AWARDS • Marie Heim-Vögtlin Postdoctoral Fellowship SNSF March 2012-August 2014• CRUS Dual career couples, September 2011 & January 2012• Human Frontiers Short Term Fellowship, September- December 2009 • Juan de la Cierva Postdoctoral Fellowship 2009-2011• EMBO Long term Fellowship 2007-2008• Wellcome Trust Prize Studentship 2001-2005• Final Year Project Award, Imperial College, 2001 Education
Hatice Altug2020-current Full Professor at the Institute of Bioengineering, EPFL, Switzerland2013-2020 Associate Professor (with tenure) at the Institute of Bioengineering, EPFL, Switzerland 2013 Associate Professor (with tenure) at Electrical and Computer Engineering Department of Boston University, USA 2007-2013 Assistant Professor (tenure-track) at Electrical and Computer Engineering Department of Boston University, USA 2007 Post-doctoral Fellow at Center for Engineering in Medicine of Harvard Medical School, USA 2000-2007 PhD. in Applied Physics at Stanford University, USA 1996-2000 B.S. in Physics at Bilkent University, Turkey
Luciano Andres AbriataEnseignement et PhD Cours Basic and advanced NMR - Level 1 A (EPFL) CH-601(x) Basic and advanced NMR - Level 2 (EPFL) CH-703 The goal is to give a sound theoretical and practical foundation in NMR for various applications in research. PhD students and post-docs who have followed the course successfully should be able to perform modern multi-dimensional NMR experiments independently. Integrative structural biology for Life sciences BIO-643 Recombinant protei
Maria BrbicMaria Brbic is an assistant professor in computer science at EPFL. Prior to joining EPFL, Maria was a postdoctoral researcher in Computer Science at Stanford University working with Jure Leskovec. She received her PhD degree from University of Zagreb in 2019, while also researching at Stanford University and University of Tokyo. Her research was awarded with the Fulbright Scholarship, L’Oreal UNESCO for Women in Science Scholarship, Branimir Jernej award for outstanding publication in biology and biomedicine, and Josip Loncar Silver Plaque award for the best doctoral dissertation. She has been named a Rising Star in EECS by MIT in 2021. Her research is focused on developing new machine learning methods and applying her methods to advance biomedical research.
Anna Carratala RipollesDuring my PhD, I mainly focused on characterizing the effect of environmental factors (namely temperature and sunlight) and disinfectants on the stability of human viral pathogens as contaminants of aquatic environments. In addition,I developed a novel source tracking tool to identify avian fecal contamination in environmental samples. Thanks to a research fellowship given by the Spanish Ministry of Science and Technology, I also had the opportunity to explore the diversity of marine viruses in Mediterranean coastal waters by genetic fingerprinting and by next generation sequencing. Later on, I became interested in the long-term effect of environmental stressors on virus communities, so I joined the LCE as a postdoc to investigate the adaptation of enteroviruses to ultraviolet radiation. For 4 years, I worked on developing UV-resistant viruses and characterizing their acquired phenotypic and genetic properties by combining directed evolution experiments, deep sequencing and population genetics. Out of the lab, I am passionate about nature, traveling and scuba diving.
Alessandro BarducciEnseignement et PhD A co-dirigé les thèses EPFL de Salvatore Assenza, Duccio Malinverni
Benjamin Marcel Daniel RothéInterests - Ribonucleoparticles biogenesis- Regulation of mRNA translation- Protein phase separation Education PhD | Biochemistry and Molecular Biology 2007 – 2012 University of Lorraine - Nancy I - FRANCE
