Publications associées à Microbial population biology

The Effects of Spatial Organization and Fluid Flow on the Social Interactions in Microbial Communities

Bacteria often engage in social interactions with neighbouring bacteria. Ecosystems which are subjected to social interactions have been widely studied in well mixed settings such as test tubes, allowing us to identify the cellular components contributing ...

EPFL2023

Active sulfur cycling in the terrestrial deep subsurface

Rizlan Bernier-Latmani, Manon Frutschi, Emma Bell, Chen Qian

The deep terrestrial subsurface remains an environment where there is limited understanding of the extant microbial metabolisms. At Olkiluoto, Finland, a deep geological repository is under construction for the final storage of spent nuclear fuel. It is th ...

2020

A modeling approach integrating microbial activity, mass transfer, and geochemical processes to interpret biological assays: An example for PCE degradation in a multi-phase batch setup

Christof Holliger, Julien Maillard, Alexandra Marie Murray

The rate at which organic contaminants can be degraded in aquatic environments is not only dependent upon specific degrading bacteria, but also upon the composition of the microbial community, mass transfer of the contaminant, and abiotic processes that oc ...

PERGAMON-ELSEVIER SCIENCE LTD2019

Light availability impacts structure and function of phototrophic stream biofilms across domains and trophic levels

Tom Ian Battin

Phototrophic biofilms are ubiquitous in freshwater and marine environments where they are critical for biogeochemical cycling, food webs and in industrial applications. In streams, phototrophic biofilms dominate benthic microbial life and harbour an immens ...

Blackwell Publishing Ltd2018

Fe(III) reduction during pyruvate fermentation by Desulfotomaculum reducens strain MI-1

Rizlan Bernier-Latmani, Julien Maillard, Elena Cristina Dalla Vecchia, Elena Suvorova Buffat

Desulfotomaculum reducens MI-1 is a Gram-positive, sulfate-reducing bacterium also capable of reducing several metals, among which is Fe(III). Very limited knowledge is available on the potential mechanism(s) of metal reduction among Gram-positive bacteria ...

Wiley-Blackwell2014

Snow cover manipulation effects on microbial community structure and soil chemistry in a mountain bog

Alexandre Buttler, Luca Bragazza, Vincent Eric Jules Jassey, Bjorn Jozef Maria Robroek

Alterations in snow cover driven by climate change may impact ecosystem functioning, including biogeochemistry and soil (microbial) processes. We elucidated the effects of snow cover manipulation (SCM) on above-and belowground processes in a temperate peat ...

Springer Netherlands2013

Biophysical controls on cluster dynamics and architectural differentiation of microbial biofilms in contrasting flow environments

Andrea Rinaldo, Enrico Bertuzzo, Tom Ian Battin, Lorenzo Mari, Samir Suweis

Ecology, with a traditional focus on plants and animals, seeks to understand the mechanisms underlying structure and dynamics of communities. In microbial ecology, the focus is changing from planktonic communities to attached biofilms that dominate microbi ...

Wiley-Blackwell2013

Ammonia exposure promotes algal biomass in an ombrotrophic peatland

Vincent Eric Jules Jassey

Nitrogen pollution affects many peatlands with consequences for their biodiversity and ecosystem function. Microorganisms control nutrient cycling and constitute most of the biodiversity of peatlands but their response to nitrogen is poorly characterised a ...

Pergamon-Elsevier Science Ltd2013

Molecular analysis of the biodiversity of protists in hydrocarbon-polluted and pristine soils

Enrique Lara

Eukaryotic microorganisms are an essential component of the Earth's global diversity. It is believed that the number of protistan taxa far outnumbers the one of viruses and bacteria. The taxonomic classification of these organisms, which also represent the ...

EPFL2005