Marion LeleuExpertise
BioinformaticsGenomicsHight-Throughput SequencingData Mining
Giovanna AmbrosiniCurrent Position Senior Scientist, School of Life Sciences, Bioinformatics Competence Center, école Polythechnique Fédérale de Lausanne, Lausanne.Senior bioinformatician and software engineer with proven experience working in higher education institutions. Solid experience in scientific computing and web design. Proficient in physics and computational genomics, with a focus on high-throughput genomic sequencing data analysis (ChIP-seq, ATAC-seq, RNA-seq, scRNA-seq, and exome sequencing) and other types of
Katia GalanExpertise
Histology, genomics, cosec and BSO
Stéphane JoostPublications Publications- List of publications
Enseignement et PhD Doctorant·es actuel·les Marco André Vieira Ruas, Manon Laetitia Pribille, Martine Valérie Besse A dirigé les thèses EPFL de Estelle Rochat, Solange Catherine Gaillard, Oliver Michele Selmoni, Anaïs Ladoy, Annie Sandrine Guillaume A co-dirigé les thèses EPFL de Sylvie Stucki, Kevin Leempoel, Martí Bosch Padrós, Andrea Salmi Cours Border Forensics PENS-318 Le cours présentera aux étudiants différentes formes de violence liée
Mykhailo BatiukExpertise
Single cell and spatial genomics (wet/dry lab), glia, psychiatry, neuroscience
I obtained my PhD (2012-2018) in KU Leuven/VIB, Belgium where I investigated astrocyte heterogeneity using single cell transcriptomics. During this period I developed tools to acutely and specifically isolate astrocytes from adult brain and identified five astrocyte subtypes in the cortex and hippocampus of mouse brain expanding previous understanding of astrocyte variability.Following my PhD, I did my first post-doc in
Johan AuwerxEnseignement et PhD Doctorant·es actuel·les Wenyu Liu, Maria Boulougouri, Giacomo Vincenzo Giorgio Von Alvensleben A dirigé les thèses EPFL de Pénélope Andreux, Mitsunori Nomura, Evan Graehl Williams, Hongbo Zhang, Virginija Jovaisaite, Elena Katsyuba, Karim Laurent Gariani, Adrienne Joëlle Laurence Mottis, Hao Li, Peiling Luan, Alexis Bachmann, Mario Romani, Xiaoxu Li, Alessia De Masi, Amélia Lalou A co-dirigé les thèses EPFL de Serge Thanh Son Ducommun, Laura Lukjanenko, Joanna Ratajczak, Angélique Sato
Aleksandar AntanasijevicEnseignement et PhD Doctorant·es actuel·les Camilla Di Giulio, Kiruthika Kumar, Yash Garodia Cours Biological chemistry I BIO-212 La biochimie est une discipline clé dans les sciences de la vie. La chimie biologique I et II sont deux cours étroitement interconnectés qui visent à comprendre en termes moléculaires les processus qui rendent la vie possible. General chemistry for SV CH-100 Ce cours couvre les notions de chimie générale, relatives à la matière et sa structure, l
Rizlan Bernier-LatmaniHIGHER EDUCATION
Summer course: Advances in Genome Technology and Bioinformatics Course at the Marine Biology Laboratory in Woods Hole, MA. October 2005.
Ph.D. 2001 Civil and Environmental Engineering, Stanford University, CA
(Advisor, Jim Leckie, Biodegradation of uranyl (UO22 )-complexed citrate and implications for uranyl mobility in the subsurface)
M.S. 1995 Civil and Environmental Engineering, Stanford University, CA
B.S. 1993 Natural Resources with Honors, Cornell University, Ithaca, NY
PROFESSIONAL EMPLOYMENT
2013-present Associate professor with tenure, School of Architecture, Civil and Environmental Engineering, Swiss Federal Institute of Technology, Lausanne
2005-2013 Assistant professor tenure track, School of Architecture, Civil and Environmental Engineering, Swiss Federal Institute of Technology, Lausanne
2001-2005 Post-Graduate Researcher, Scripps Institution of Oceanography, La Jolla, CA (PI: Brad Tebo)
1995-2001 Graduate Research Assistant, Stanford University (Advisor: Jim Leckie)
RESEARCH INTERESTS
Gemicrobiology, metal-bacteria interactions, biological reduction and oxidation of metals, biological nanoparticle formation; Characterization of microbial communities in terrestrial environments; Using genomic, microscopic and spectroscopic tools to understand metal transformations by microorganisms.
ACADEMIC HONORS
Rotary Foundation University Professor grant, 2004.
Swiss National Science Foundation Post-doctoral Fellowship, 2001.
Leon B. Reynolds Memorial Scholarship in the School of Engineering at Stanford University, 1995-96.
Graduated with Honors from Cornell University, 1993.
BIBLIOMETRY
http://www.researcherid.com/rid/E-4398-2011
ResearcherID: E-4398-2011 Stewart ColeProfessor Stewart Cole is an international authority in bacterial molecular-genetics and genomics. He has made outstanding contributions in several fields including: bacterial anaerobic electron transport; genome analysis of retroviruses and papillomaviruses; antibiotic resistance mechanisms; and the molecular microbiology of toxigenic clostridia. His studies on isoniazid and multidrug resistance in Mycobacterium tuberculosis, together with his pioneering work on the pathogenicity, evolution and genomics of the tubercle and leprosy bacilli, have made him an undisputed leader in the field of mycobacterial research. The findings of his research are of direct relevance to public health and disease-control in both the developing world and the industrialised nations. He has published over 250 scientific papers and review articles, and holds many patents.
Carmela González TroncosoEnseignement et PhD Doctorant·es actuel·les Saiid El Hajj Chehade, Eric Jollès, Christian Knabenhans, Boya Wang, Mathilde Aliénor Raynal A dirigé les thèses EPFL de Sandra Deepthy Siby, Sylvain Chatel, Christian Vincent Mouchet, Bogdan Kulynych, Kasra Edalatnejadkhamene, Sinem Sav, Theresa Stadler, Klim Kireev Cours Privacy at the communication layer CS-721
Régis Lionel VivienExpertise
Systématique classique (oligochètes aquatiques)Ecologie aquatiqueSystématique moléculaireEcotoxicologie des sédiments
Mission
Réalisation de projets de recherche dans les domaines de la systématique, écologie et écotoxicologie:- Application, validation et développement de méthodes biologiques basées sur l'étude des communautés d'oligochètes pour l'évaluation de la qualité des sédiments des cours d'eau et des lacs (sédiment fins/sableux ; sédiments grossiers/milieu hyporhéique)- Développement d'ind
Hubert GiraultEducation: 1979 - Engineering diploma from Grenoble Institute of Technology. FRANCE. 1982 - PhD- Department of Chemistry, University of Southampton. Thesis entitled : Interfacial studies using drop image processing techniques. Positions : 1982 - 1984 SERC Research Fellow. University of Southampton. 1984 - 1985 CNRS Research Fellow. University of Southampton. 1985 - 1992 Lecturer in Physical Chemistry, University of Edinburgh. 1992 - Professor of Physical Chemistry, Ecole Polytechnique Fédérale de Lausanne. 2011 - 2014 Dean of Bachelor and Master studies Hubert Girault is the author of 2 textbooks, the co-author of about 600 scientific publications with more than 20'000 citations and the co-inventor of more than 15 patents. During his academic career, he has supervised 70 PhD students. 30 alumni of his laboratory are now Professors. Honours: Faraday medal 2006, Royal Society of Chemistry, Fellow of the International Society of Electrochemistry 2007, Reilley Award 2015. Fellow of the Electrochemical Society (USA), Shikata International medal, Polarography Society of Japan. Associate editor of Chemical Science
Suliana ManleyExpertise
Super-resolution fluorescence microscopy, single molecule imaging in cells, cellular biophysics, bacterial cell cycle
Enseignement et PhD Doctorant·es actuel·les Emine Berna Durmus, Santiago Nicolás Rodriguez Alvarez, Laila Elfeky, Alara Kiris, Hale-Seda Ivo Radoykova A dirigé les thèses EPFL de Julia Gunzenhäuser, Aleksandr Benke, Lina Carlini, Andrea Callegari, Aster Louis K Vanhecke, Anna Archetti, Dora Mahecic, Timo Henry René Rey, Julius Winter, Chen Zhang, Jenny Sülzle, Sheda Ben Nejma Cou
Elisa OricchioEnseignement et PhD Doctorant·es actuel·les Vamsi Krishna Polavarapu, Asli Ece Kasapoglu, Konstantina Georgakopoulou, Eleni Balli A dirigé les thèses EPFL de Maria Christine Donaldson, Elena Battistello, Daniel Pereira Duarte, Frédérica Schyrr, Ruxandra-Andreea Lambuta, Aaron Simone Petruzzella, Jixing Zhong, Justine Epiney Cours Cancer biology I BIO-471 Le cours couvre les mécanismes moléculaires du développement du cancer: le cycle cellulaire; la stabilité du génome; les oncogènes; les g
