Anna Carratala RipollesDuring my PhD, I mainly focused on characterizing the effect of environmental factors (namely temperature and sunlight) and disinfectants on the stability of human viral pathogens as contaminants of aquatic environments. In addition,I developed a novel source tracking tool to identify avian fecal contamination in environmental samples. Thanks to a research fellowship given by the Spanish Ministry of Science and Technology, I also had the opportunity to explore the diversity of marine viruses in Mediterranean coastal waters by genetic fingerprinting and by next generation sequencing. Later on, I became interested in the long-term effect of environmental stressors on virus communities, so I joined the LCE as a postdoc to investigate the adaptation of enteroviruses to ultraviolet radiation. For 4 years, I worked on developing UV-resistant viruses and characterizing their acquired phenotypic and genetic properties by combining directed evolution experiments, deep sequencing and population genetics. Out of the lab, I am passionate about nature, traveling and scuba diving.
Stéphane JoostPublications Publications- List of publications
Enseignement et PhD Doctorant·es actuel·les Marco André Vieira Ruas, Manon Laetitia Pribille, Martine Valérie Besse A dirigé les thèses EPFL de Estelle Rochat, Solange Catherine Gaillard, Oliver Michele Selmoni, Anaïs Ladoy, Annie Sandrine Guillaume A co-dirigé les thèses EPFL de Sylvie Stucki, Kevin Leempoel, Martí Bosch Padrós, Andrea Salmi Cours Border Forensics PENS-318 Le cours présentera aux étudiants différentes formes de violence liée
Didier TronoAprès des études de médecine à l’Université de Genève et une formation clinique en pathologie, médecine interne et maladies infectieuses à Genève et au Massachusetts General Hospital de Boston, Didier Trono s’engage dans une carrière scientifique au Whitehead Institute du MIT. En 1990, il est recruté par le Salk Institute de San Diego pour lancer un centre de recherche sur le SIDA. Il rentre en Europe sept ans plus tard, avant de prendre en 2004 les rênes de la toute nouvelle faculté des Sciences de la Vie de l’EPFL, dont il orchestre le développement et qu’il dirige jusqu’en 2012. Il participe aujourd’hui activement à la coordination des efforts de la Suisse en vue de l’intégration des nouvelles technologies dans le domaine de la médecine de précision et de la santé personnalisée.
Priscilla TurelliPositions
2005-présent: Chercheur, Ecole Polytechnique Fédérale de Lausanne, Laboratoire de virologie et génétique, Suisse.
2001-2004: Chercheur dans le laboratoire du Pr D. Trono, Département de Microbiologie, Ecole de Médecine de Genève, Suisse.
1997-2001: Etudiante Post-doctorante dans le laboratoire du Pr D. Trono, Département de Microbiologie, Ecole de Médecine de Genève, Suisse.
Honneurs et prix
2004: Bristol-Myers Squibb AIDS AWARD
1997-1999: Human Frontier Science Program fellowship
Education
June 1997:
PhD in cellular biology.
Final mark:jury congratulations.
Université de la Méditerranée, France.
June 1993:
Post-graduate diploma in cellular biology and microbiology.
INSERM U372, Marseille-Luminy, université de Provence, France.
June 1992:
Master in cellular biology Specialty: genetic.
Final mark: Best master student of this year.
Université de la Méditerranée, France.
June 1987:
Scientific baccalaureate, France.
Enseignement
2009-présent: co-directeur de thèses, Ecole Polytechnique Fédérale de Lausanne, Suisse
2002: Tuteur en virologie pour les étudiants de médecine, Ecole de Médecine de Genève, Suisse.
1996-1997: Tuteur en biologie moléculaire et biochimie, Université de la Méditerranée, Aix Marseille II Bastien MangeatEnseignement et PhD Cours Methods: omics in biomedical research BIOENG-519 Les méthodologies à haut débit, appelées "Omiques", permettent de caractériser la complexité et la dynamique de tout système biologique. Ce cours fournira une description générale des méthodes liées au domaine des "Omiques", suivie de rotations pratiques dans les plateformes participantes.
Stewart ColeProfessor Stewart Cole is an international authority in bacterial molecular-genetics and genomics. He has made outstanding contributions in several fields including: bacterial anaerobic electron transport; genome analysis of retroviruses and papillomaviruses; antibiotic resistance mechanisms; and the molecular microbiology of toxigenic clostridia. His studies on isoniazid and multidrug resistance in Mycobacterium tuberculosis, together with his pioneering work on the pathogenicity, evolution and genomics of the tubercle and leprosy bacilli, have made him an undisputed leader in the field of mycobacterial research. The findings of his research are of direct relevance to public health and disease-control in both the developing world and the industrialised nations. He has published over 250 scientific papers and review articles, and holds many patents.
Bernard LanzExpertise
Spectroscopie par résonance magnétiqueSpectroscopie 1H, 13C, 15N dynamique in vivoTomographie par émission de positronsModèles mathématiques de métabolisme
Position @ CIBM MRI AIT (EPFL)
Senior Research Staff Scientist, 14.1T MRI and PET Operational Manager, CIBM MRI AIT (EPFL)
Pubmed
https://www.ncbi.nlm.nih.gov/pubmed/?term=bernard lanz
Enseignement et PhD Doctorant·es actuel·les Alessio Siviglia, Juliette Beaubis Cours CIBM translational MR neuroimaging & spectroscopy PHYS-770 Bruno Emanuel Ferreira De Sousa CorreiaThroughout my PhD and postdoctoral studies I was trained in world-renowned laboratories and institutions in the United States of America (University of Washington and The Scripps Research Institute). Very early in my scientific career I found out my fascination about protein structure and function. My PhD studies evolved in the direction of immunogen design and vaccine engineering which sparked my interest in the many needs and opportunities in vaccinology and translational research. My efforts resulted in an enlightening piece of work where for the first time, computationally designed immunogens elicited potent neutralizing antibodies. During my postdoctoral studies I joined a chemical biology laboratory at the Scripps Research Institute. In this stage I developed novel chemoproteomics methods for the identification of protein-small molecule interaction sites in complex proteomes. In March 2015, I joined the École Polytechnique Fédérale de Lausanne (EPFL) – Switzerland as a tenure track assistant professor. The focus of my research group is to develop computational tools for protein design with particular emphasis in applying these strategies to immunoengineering (e.g. vaccine and cancer immunotherapy). The activities in my laboratory focus on computational design methods development and experimental characterization of the designed proteins. Our laboratory has been awarded with 2 prestigious research grants from the European Research Council. Lastly, I have been awarded the prize for best teacher of Life sciences in 2019.
Vassily HatzimanikatisEnseignement et PhD Doctorant·es actuel·les Denis Alain Henri Lucien Joly, Luca Milazzo, David Liaskos, Konrad Lagoda, Omar Keshk, Yigit Sibal, Ioannis Tzegiannakis A dirigé les thèses EPFL de Keng Cher Soh, Julien Racle, Noushin Hadadi, Stefano Andreozzi, Stepan Tymoshenko, Meriç Ataman, Joana Raquel Pinto Vieira, Tiziano Dallavilla, Yves Berset, Anush Chiappino-Pepe, Milenko Tokic, Tuure Eelis Hameri, Jasmin Maria Hafner, Homa Mohammadi Peyhani, Daniel Robert Weilandt, Zhaleh Hosseini, Sofia Tsouka, Mar
Kristina SchoonjansExpertise
Bile acid signalingNutrient sensingIntermediary metabolismMetabolic disorders
Enseignement et PhD Doctorant·es actuel·les Adrien Faure A dirigé les thèses EPFL de Pan Xu, Ece Yildiz, Nadia Bresciani, Yu Sun, Francesca Pontanari, Alejandro Alonso Calleja A co-dirigé les thèses EPFL de Mitsunori Nomura, Pan Xu, Katyayanee Neopane, Lucie Camille Chanvillard, Jakob Josef Langer, Bilge Sen Elçi Cours Biologie générale BIOENG-110 Le but du cours est de fournir un aperçu général de la b
César PulgarinExpertise
Mechanistic study of Advanced Oxidation Processes AOPs (i.e. electrochemical, TiO2 photo-assisted, ultrasound, photo-Fenton) and their combinations for chemical and biological pollutants treatment in industrial and domestic wastewaterAction mode of solar light during inactivation of bacteria and virus in water and surfaces. Coupling of biological and AOP systems for industrial waste-waters treatmentDesign, preparation, chemical characterization, activity evaluation and mechanistic description of (
Cristina Ramona Cudalbu MoldovanCristina Cudalbu obtained her Bachelors of Science degree in Medical Physics in 2002 and Masters of Science degree in Biophysics and Medical Physics in 2003, both from University Babes-Bolyai, Cluj-Napoca, Romania. In 2006 she obtained her PhD degree in Localized Proton MRS and time domain quantification of cerebral metabolites at 7T and 4.7T at University Lyon 1, RMN Laboratory, Villeurbanne, France.In 2007, she joined, as a Scientist, the Laboratory for Functional and Metabolic Imaging at EPFL, where she implemented new acquisition and quantification techniques for in vivo nitrogen, proton and carbon MRS for preclinical studies. Starting 2012, Cristina Cudalbu was appointed as Research Staff Scientist and 9.4T MRI Operational Manager at Centre d’Imagerie Biomédicale (CIBM) at EPFL. She is now developing new research lines at CIBM, being oriented towards new acquisition and quantification techniques for in vivo proton, phosphorous, carbon, nitrogen MRS and fast MRSI, diffusion weighted spectroscopy and brain macromolecules quantification. She is now applying these developments on chronic hepatic encephalopathy, a research area that she developed at CIBM (https://actu.epfl.ch/news/when-liver-disease-affects-the-brain/), and on different collaborative projects with researchers from the five partner institutions of CIBM. 