Luc PatinyExpertise
Cheminformatics, Data management, Data processing, Javascript developmentLast updated on April 16, 2023.
GitHub
https://github.com/lpatiny
Enseignement et PhD Cours Analyse structurale (pour SFU) UNIL-129 Acquisition des notions fondamentales liées à l'identification de la structure de petites molécules organiques au moyen des techniques de spectrométrie de masse, spectroscopie infra-rouge et résonance magnétique nucléaire. Basic and advanced NMR - Level 1 A (EPFL) CH-60 Bruno Emanuel Ferreira De Sousa CorreiaThroughout my PhD and postdoctoral studies I was trained in world-renowned laboratories and institutions in the United States of America (University of Washington and The Scripps Research Institute). Very early in my scientific career I found out my fascination about protein structure and function. My PhD studies evolved in the direction of immunogen design and vaccine engineering which sparked my interest in the many needs and opportunities in vaccinology and translational research. My efforts resulted in an enlightening piece of work where for the first time, computationally designed immunogens elicited potent neutralizing antibodies. During my postdoctoral studies I joined a chemical biology laboratory at the Scripps Research Institute. In this stage I developed novel chemoproteomics methods for the identification of protein-small molecule interaction sites in complex proteomes. In March 2015, I joined the École Polytechnique Fédérale de Lausanne (EPFL) – Switzerland as a tenure track assistant professor. The focus of my research group is to develop computational tools for protein design with particular emphasis in applying these strategies to immunoengineering (e.g. vaccine and cancer immunotherapy). The activities in my laboratory focus on computational design methods development and experimental characterization of the designed proteins. Our laboratory has been awarded with 2 prestigious research grants from the European Research Council. Lastly, I have been awarded the prize for best teacher of Life sciences in 2019.
Berend SmitEnseignement et PhD Doctorant·es actuel·les Anastasia Blokhina, Raluca-Ana Kessler, Seyed Amirmohammad Elahi, Juliette Veronique Schleicher, Yutao Li, Xin Jin, Sara Bassetta, Beatriz Bueno Mouriño A dirigé les thèses EPFL de Samantha Lynn Anderson, Daniele Ongari, Andrzej Gladysiak, Seyedmohamad Moosavi, Arunraj Chidambaram, Bardiya Valizadeh, Stavroula Kampouri, Fatmah Ebrahim, Fatma Pelin Uran, Andres Adolfo Ortega Guerrero, Kevin Maik Jablonka, Elias Moubarak, Sauradeep Majumdar, Miriam Jasmin Pougin,
Paolo De Los RiosEnseignement et PhD Doctorant·es actuel·les María Li López Bautista, Subhasis Dehury, Lisa Gennai A dirigé les thèses EPFL de Giovanni Salvi, Thomas Petermann, David Gfeller, Cécile Caretta Cartozo, David Morton de Lachapelle, Carlo Maffi, Lucio Floretta, Salvatore Assenza, Duccio Malinverni, Alberto Stefano Sassi, Andrea Martini, Solange Flatt, Adélaïde Alice Mohr, Shiling Liang, Alexandra Shelest, Davide Cois A co-dirigé les thèses EPFL de Lorenzo Talamanca Cours EDCB seminar series BIOENG-606
Stewart ColeProfessor Stewart Cole is an international authority in bacterial molecular-genetics and genomics. He has made outstanding contributions in several fields including: bacterial anaerobic electron transport; genome analysis of retroviruses and papillomaviruses; antibiotic resistance mechanisms; and the molecular microbiology of toxigenic clostridia. His studies on isoniazid and multidrug resistance in Mycobacterium tuberculosis, together with his pioneering work on the pathogenicity, evolution and genomics of the tubercle and leprosy bacilli, have made him an undisputed leader in the field of mycobacterial research. The findings of his research are of direct relevance to public health and disease-control in both the developing world and the industrialised nations. He has published over 250 scientific papers and review articles, and holds many patents.
Iurii TimrovProfessional employment
Postdoctoral researcherFebruary 2016 - presentAdvisor: Prof. Nicola MarzariPlace: STI IMX THEOS, Ecole Polytechnique Federale de Lausanne (Lausanne, Switzerland)Postdoctoral researcherJuly 2013 - January 2016Advisor: Prof. Stefano BaroniPlace: Condensed Matter Sector, Scuola Internazionale Superiore di Studi Avanzati (Trieste, Italy)Postdoctoral researcherApril 2013 - June 2013Advisor: Dr. Nathalie VastPlace: Laboratoire des Solides Irradies, Ecole Polytechnique (Palaiseau, France)
Education
PhDSeptember 2009 - March 2013Advisor: Dr. Nathalie Vast Place: Laboratoire des Solides Irradi'es, Ecole Polytechnique (Palaiseau, FranceTitle: Ab initio study of plasmons and electron-phonon coupling in bismuth: from free-carrier absorption towards a new method for electron energy-loss spectroscopyDate of defense: 27.03.2013Honors: PhD degree in physics with honors ("Tres honorable")Master in PhysicsSeptember 2008 - June 2009Place: Department of Theoretical Physics, National Taras Shevchenko University of Kyiv (Kyiv, Ukraine)Honors: Master's degree with honorsBachelor in PhysicsSeptember 2004 - June 2008Place: Department of Theoretical Physics, National Taras Shevchenko University of Kyiv (Kyiv, Ukraine)Honors: Bachelor's degree with honorsHigh School StudiesSeptember 1994 - June 2004Place: Collegium 11 (Chernigov, Ukraine)Honors: Honors degree with a Gold medal
Guillaume Romain ObozinskiGuillaume Obozinski est Chef Data Scientist Adjoint au Swiss Data Science Center. Il a reçu le diplôme de doctorat en Statistiques de l'Université de Californie à Berkeley en 2009. Post-doc puis chercheur dans les équipes Willow et Sierra à l'INRIA / Ecole Normale Supérieure à Paris jusqu'en 2012, il a été chercheur à l'Ecole des Ponts ParisTech à Paris jusqu'en 2018. Ses domaines d'expertise sont principalement en apprentissage automatique, en statistique et en optimisation. Il a travaillé au fil du temps sur les méthodes d'apprentissage parcimonieux, les techniques d'optimisation pour l'apprentissage, les modèles graphiques probabilistes, l'apprentissage relationnel et les représentations vectorielles sémantiques. Il est intéressé par l'application de ces techniques à tous les domaines des data sciences, depuis la biologie computationnelle à l'analyse automatique d'images.
