Giovanna AmbrosiniCurrent Position Senior Scientist, School of Life Sciences, Bioinformatics Competence Center, école Polythechnique Fédérale de Lausanne, Lausanne.Senior bioinformatician and software engineer with proven experience working in higher education institutions. Solid experience in scientific computing and web design. Proficient in physics and computational genomics, with a focus on high-throughput genomic sequencing data analysis (ChIP-seq, ATAC-seq, RNA-seq, scRNA-seq, and exome sequencing) and other types of
Christian IseliExpertise
BioinformatiqueComputer engineering
Enseignement et PhD Cours Bioinformatic Analysis of RNA-sequencing (Fall) BIO-693(a) Due to its success, this course will take place from 1st to 5th September 2025 in room AAC 0 20.It introduces the workflows and techniques that are used for the analysis of bulk and single-cell RNA-seq data. It empowers students to understand and analyze their own data. Bioinformatic Analysis of RNA-sequencing (Spring) BIO-693(b) Methods: omics
Nicolas Jean Philippe GuexEnseignement et PhD Cours Bioinformatic Analysis of RNA-sequencing (Fall) BIO-693(a) Due to its success, this course will take place from 1st to 5th September 2025 in room AAC 0 20.It introduces the workflows and techniques that are used for the analysis of bulk and single-cell RNA-seq data. It empowers students to understand and analyze their own data. Bioinformatic Analysis of RNA-sequencing (Spring) BIO-693(b) Methods: omics in biomedical research BIOENG-519
Anne-Florence Raphaëlle BitbolI was trained in physics, and always had a strong interest in biology. I am broadly interested in understanding biological phenomena in a quantitative way, through physical concepts and mathematical and computational tools. I investigate the relative impacts of optimization and historical contingency in biological evolution, both at the scale of protein sequences and at the scale of microbial populations.Here is my research group website.Curriculum vitae Here is my complete CV. Professional experience:Since
Stéphane JoostPublications Publications- List of publications
Enseignement et PhD Doctorant·es actuel·les Marco André Vieira Ruas, Manon Laetitia Pribille, Martine Valérie Besse A dirigé les thèses EPFL de Estelle Rochat, Solange Catherine Gaillard, Oliver Michele Selmoni, Anaïs Ladoy, Annie Sandrine Guillaume A co-dirigé les thèses EPFL de Sylvie Stucki, Kevin Leempoel, Martí Bosch Padrós, Andrea Salmi Cours Border Forensics PENS-318 Le cours présentera aux étudiants différentes formes de violence liée
Ute KochEnseignement et PhD A co-dirigé les thèses EPFL de Delphine Tardivon, Mateusz Waldemar Antoszewski Cours Practical - Radtke Lab BIO-630 Self renewing organs.Flow Cytometry as tools for the analysis of the hematopoietic system.
Johan AuwerxEnseignement et PhD Doctorant·es actuel·les Wenyu Liu, Maria Boulougouri, Giacomo Vincenzo Giorgio Von Alvensleben A dirigé les thèses EPFL de Pénélope Andreux, Mitsunori Nomura, Evan Graehl Williams, Hongbo Zhang, Virginija Jovaisaite, Elena Katsyuba, Karim Laurent Gariani, Adrienne Joëlle Laurence Mottis, Hao Li, Peiling Luan, Alexis Bachmann, Mario Romani, Xiaoxu Li, Alessia De Masi, Amélia Lalou A co-dirigé les thèses EPFL de Serge Thanh Son Ducommun, Laura Lukjanenko, Joanna Ratajczak, Angélique Sato
Stewart ColeProfessor Stewart Cole is an international authority in bacterial molecular-genetics and genomics. He has made outstanding contributions in several fields including: bacterial anaerobic electron transport; genome analysis of retroviruses and papillomaviruses; antibiotic resistance mechanisms; and the molecular microbiology of toxigenic clostridia. His studies on isoniazid and multidrug resistance in Mycobacterium tuberculosis, together with his pioneering work on the pathogenicity, evolution and genomics of the tubercle and leprosy bacilli, have made him an undisputed leader in the field of mycobacterial research. The findings of his research are of direct relevance to public health and disease-control in both the developing world and the industrialised nations. He has published over 250 scientific papers and review articles, and holds many patents.
Kristina SchoonjansExpertise
Bile acid signalingNutrient sensingIntermediary metabolismMetabolic disorders
Enseignement et PhD Doctorant·es actuel·les Adrien Faure A dirigé les thèses EPFL de Pan Xu, Ece Yildiz, Nadia Bresciani, Yu Sun, Francesca Pontanari, Alejandro Alonso Calleja A co-dirigé les thèses EPFL de Mitsunori Nomura, Pan Xu, Katyayanee Neopane, Lucie Camille Chanvillard, Jakob Josef Langer, Bilge Sen Elçi Cours Biologie générale BIOENG-110 Le but du cours est de fournir un aperçu général de la b
Anna Carratala RipollesDuring my PhD, I mainly focused on characterizing the effect of environmental factors (namely temperature and sunlight) and disinfectants on the stability of human viral pathogens as contaminants of aquatic environments. In addition,I developed a novel source tracking tool to identify avian fecal contamination in environmental samples. Thanks to a research fellowship given by the Spanish Ministry of Science and Technology, I also had the opportunity to explore the diversity of marine viruses in Mediterranean coastal waters by genetic fingerprinting and by next generation sequencing. Later on, I became interested in the long-term effect of environmental stressors on virus communities, so I joined the LCE as a postdoc to investigate the adaptation of enteroviruses to ultraviolet radiation. For 4 years, I worked on developing UV-resistant viruses and characterizing their acquired phenotypic and genetic properties by combining directed evolution experiments, deep sequencing and population genetics. Out of the lab, I am passionate about nature, traveling and scuba diving.
Hélène RuffieuxEnseignement et PhD Cours Probabilités et statistique MATH-234(a)
