Publications related to TRACKASTRA: Transformer-Based Cell Tracking for Live-Cell Microscopy

Related publications (13)

Towards Reliable Evaluation and Fast Training of Robust Semantic Segmentation Models

Adversarial robustness has been studied extensively in image classification, especially for the ℓ∞-threat model, but significantly less so for related tasks such as object detection and semantic segmentation, where attacks turn out to be a much harder opti ...

Springer Science and Business Media Deutschland GmbH2025

Do You Trust Your Model? Emerging Malware Threats in the Deep Learning Ecosystem

Fernando Perez Cruz

Training high-quality deep learning models is a challenging task due to computational and technical requirements. A growing number of individuals, institutions, and companies increasingly rely on pre-trained, third-party models made available in public rep ...

2025

Adversarial Training For Defense Against Label Poisoning Attacks

Volkan Cevher

As machine learning models grow in complexity and increasingly rely on publicly sourced data, such as the human-annotated labels used in training large language models, they become more vulnerable to label poisoning attacks. These attacks, in which adversa ...

2025

Parameter-efficient Methods for Training and Inference of Transformer-based Models

Mohammadreza Banaei

Recent advancements in natural language processing, driven by the success of large language models, have led to the scaling up of models to unprecedented sizes. While these models have achieved remarkable performance across various tasks, their computation ...

EPFL2025

Machine learning Hubbard parameters with equivariant neural networks

Nicola Marzari, Iurii Timrov, Martin Uhrin, Luca Binci, Austin Jacob Zadoks

Density-functional theory with extended Hubbard functionals (DFT + U + V) provides a robust framework to accurately describe complex materials containing transition-metal or rare-earth elements. It does so by mitigating self-interaction errors inherent to ...

NATURE PORTFOLIO2025

A prediction rigidity formalism for low-cost uncertainties in trained neural networks

Michele Ceriotti, Federico Grasselli, Sanggyu Chong, Filippo Bigi

Quantifying the uncertainty of regression models is essential to ensure their reliability, particularly since their application often extends beyond their training domain. Based on the solution of a constrained optimization problem, this work proposes ‘pre ...

2024

Enhancing Peer Review with AI-Powered Suggestion Generation Assistance: Investigating the Design Dynamics

Xiaotian Su, Seyed Parsa Neshaei

While writing peer reviews resembles an important task in science, education, and large organizations, providing fruitful suggestions to peers is not a straightforward task, as different user interaction designs of text suggestion interfaces can have diver ...

Association for Computing Machinery2024

A two-level resolution neural network with enhanced interpretability for freeway traffic forecasting

Nikolaos Geroliminis, Semin Kwak, Danya Li

© The Author(s) 2024.Deep learning models are widely used for traffic forecasting on freeways due to their ability to learn complex temporal and spatial relationships. In particular, graph neural networks, which integrate graph theory into deep learning, h ...

Nature Research2024

Qualify-as-you-go: sensor fusion of optical and acoustic signatures with contrastive deep learning for multi-material composition monitoring in laser powder bed fusion process

Christian Leinenbach, Antonios Nikolaos Baganis

Growing demand for multi-material Laser Powder Bed Fusion (LPBF) faces process control and quality monitoring challenges, particularly in ensuring precise material composition. This study explores optical and acoustic emission signals during LPBF processes ...

Taylor & Francis Ltd2024

Machine Learning for Optical Motion Capture-Driven Musculoskeletal Modelling from Inertial Motion Capture Data

Rahul Sharma

Marker-based Optical Motion Capture (OMC) systems and associated musculoskeletal (MSK) modelling predictions offer non-invasively obtainable insights into muscle and joint loading at an in vivo level, aiding clinical decision-making. However, an OMC system ...

MDPI2023

Point-process-based Representation Learning for Electronic Health Records

David Atienza Alonso, Anisoara Ionescu, Hojjat Karami

Irregular sampling of time series in electronic health records (EHRs) presents a challenge for the development of machine learning models. Additionally, the pattern of missing data in certain clinical variables is not random, but depends on the decisions o ...

IEEE2023

Fully learnable deep wavelet transform for unsupervised monitoring of high-frequency time series

Olga Fink, Gaëtan Michel Frusque

High-frequency (HF) signals are ubiquitous in the industrial world and are of great use for monitoring of industrial assets. Most deep-learning tools are designed for inputs of fixed and/or very limited size and many successful applications of deep learnin ...

2023

Large deviations in the perceptron model and consequences for active learning

Lenka Zdeborová, Luca Saglietti

Active learning (AL) is a branch of machine learning that deals with problems where unlabeled data is abundant yet obtaining labels is expensive. The learning algorithm has the possibility of querying a limited number of samples to obtain the corresponding ...

2021