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Sub-micrometer morphology of human atherosclerotic plaque revealed by synchrotron radiation-based mu CT-A comparison with histology

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Related publications (28)

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Modular segmentation, spatial analysis and visualization of volume electron microscopy datasets

Volume electron microscopy is the method of choice for the in situ interrogation of cellular ultrastructure at the nanometer scale, and with the increase in large raw image datasets generated, improving computational strategies for image segmentation and s ...

Nature Portfolio2024

Advancing Self-Supervised Deep Learning for 3D Scene Understanding

Seyed Mohammad Mahdi Johari

Recent advancements in deep learning have revolutionized 3D computer vision, enabling the extraction of intricate 3D information from 2D images and video sequences. This thesis explores the application of deep learning in three crucial challenges of 3D com ...

EPFL2024

Aggregating Spatial and Photometric Context for Photometric Stereo

David Honzátko

Photometric stereo, a computer vision technique for estimating the 3D shape of objects through images captured under varying illumination conditions, has been a topic of research for nearly four decades. In its general formulation, photometric stereo is an ...

EPFL2024

Automated post-earthquake damage assessment of stone masonry buildings integrating machine learning, computer vision, and physics-based modeling

Bryan German Pantoja Rosero

Current post-earthquake damage assessment methodologies are not only time-consuming but also subjective in nature and difficult to document. Recent advancements in artificial intelligence and technological devices make it possible to accomplish this task a ...

EPFL2023

Automated neuron tracking inside moving and deforming C. elegans using deep learning and targeted augmentation

Ariane Andrée Marie Delrocq, Sahand Jamal Rahi

Reading out neuronal activity from three-dimensional (3D) functional imaging requires segmenting and tracking individual neurons. This is challenging in behaving animals if the brain moves and deforms. The traditional approach is to train a convolutional n ...

Nature Publishing Group2023

Automated image-based generation of finite element models for masonry buildings

Katrin Beyer, Radhakrishna Achanta, Bryan German Pantoja Rosero

To predict the response of masonry buildings to various types of loads, engineers use finite element models, specifically solid-element and macro-element models. For predicting masonry responses to seismic events in particular, equivalent frame models-a su ...

SPRINGER2023

Combining European and US risk prediction models with polygenic risk scores to refine cardiovascular prevention: the CoLaus|PsyCoLaus Study

Jacques Fellay, Christian Axel Wandall Thorball

Lay Summary The aim of this study is to determine whether using polygenic risk scores improves the prediction of atherosclerotic cardiovascular disease risk when combined with clinical scores currently recommended by European and US guidelines on cardiovas ...

OXFORD UNIV PRESS2023

Automatic Parameterization for Aerodynamic Shape Optimization via Deep Geometric Learning

Pascal Fua, Zhen Wei

We propose two deep learning models that fully automate shape parameterization for aerodynamic shape optimization. Both models are optimized to parameterize via deep geometric learning to embed human prior knowledge into learned geometric patterns, elimina ...

2023

Differentiable Physically Based Rendering: Algorithms, Systems and Applications

Merlin Eléazar Nimier-David

Physically based rendering methods can create photorealistic images by simulating the propagation and interaction of light in a virtual scene. Given a scene description including the shape of objects, participating media, material properties, etc., the sim ...

EPFL2022

Bragg edge tomography characterization of additively manufactured 316L steel

Roland Logé, Christian Leinenbach, Nikola Kalentics

In this work we perform a neutron Bragg edge tomography of stainless steel 316L additive manufacturing samples, one as built via standard laser powder bed fusion, and one using the novel three-dimensional (3D) laser shock peening technique. First, we consi ...

AMER PHYSICAL SOC2022

Efficient and Accurate Physically-Based Differentiable Rendering

Delio Aleardo Vicini

Physically-based rendering algorithms generate photorealistic images of virtual scenes. By simulating light paths in a scene, complex physical effects such as shadows, reflections and volumetric scattering can be reproduced. Over the last decade, physicall ...

EPFL2022

Impact and implications of mixed plaque class in automated characterization of complex atherosclerotic lesions

Atherosclerosis is a complex disease altering vasculature morphology, and subsequently flow, with progressive plaque formation, mural disruption, and lumen occlusion. Determination of clinically-relevant plaque components-particularly calcium, lipid, and f ...

PERGAMON-ELSEVIER SCIENCE LTD2022

Image-based geometric digital twinning for stone masonry elements

Katrin Beyer, Bryan German Pantoja Rosero, Savvas Saloustros

We present an image-based pipeline for generating geometrical digital twins (GDTs) of stone masonry elements with detail down to the stone level. For this purpose, we acquire RGB images of the individual stones and of the wall during the construction phase ...

2022

Unsupervised Visual Entity Abstraction towards 2D and 3D Compositional Models

Object-centric learning has gained significant attention over the last years as it can serve as a powerful tool to analyze complex scenes as a composition of simpler entities. Well-established tasks in computer vision, such as object detection or instance ...

EPFL2022

Polygenic Risk Scores for Prediction of Subclinical Coronary Artery Disease in Persons Living With HIV: The Swiss HIV Cohort Study

Jacques Fellay, Christian Axel Wandall Thorball

Background. In people living with human immunodeficiency virus (HIV) (PLWH), individual polygenic risk scores (PRSs) are associated with coronary artery disease (CAD) events. Whether PRSs are associated with subclinical CAD is unknown. ...

OXFORD UNIV PRESS INC2022

Weakly Supervised Volumetric Image Segmentation with Deformed Templates

Pascal Fua, Pamuditha Udaranga Wickramasinghe, Mian Akbar Shah

There are many approaches to weakly-supervised training of networks to segment 2D images. By contrast, existing approaches to segmenting volumetric images rely on full-supervision of a subset of 2D slices of the 3D volume. We propose an approach to volume ...

Springer2022

Fast 3D Modeling of Prosthetic Robotic Hands Based on a Multi-Layer Deformable Design

Daniel Thalmann

Current research of designing prosthetic robotic hands mainly focuses on improving their functionality by devising new mechanical structures and actuation systems. Most of existing work relies on a single structure/system (e.g., bone-only or tissue-only) a ...

WHIOCE PUBLISHING PTE LTD, SINGAPORE2022

Differentiable Signed Distance Function Rendering

Wenzel Alban Jakob, Delio Aleardo Vicini, Sébastien Nicolas Speierer

Physically-based differentiable rendering has recently emerged as an attractive new technique for solving inverse problems that recover complete 3D scene representations from images. The inversion of shape parameters is of particular interest but also pose ...

ASSOC COMPUTING MACHINERY2022

A Non-Exponential Transmittance Model for Volumetric Scene Representations

Wenzel Alban Jakob, Delio Aleardo Vicini

We introduce a novel transmittance model to improve the volumetric representation of 3D scenes. The model can represent opaque surfaces in the volumetric light transport framework. Volumetric representations are useful for complex scenes, and become increa ...

ASSOC COMPUTING MACHINERY2021

Perceptual Quality of Point Clouds with application to Compression

Evangelos Alexiou

Modern information technologies and human-centric communication systems employ advanced content representations for richer portrayals of the real world. The newly adopted imaging modalities offer additional information cues and permit the depiction of real ...

EPFL2021