Publications related to Effects of extraction methods on the composition and molar mass distributions of exopolymeric substances of the bacterium Sinorhizobium meliloti

New Polymers from Biomass-Derived Hydroxycinnamic Acid Derivatives

Polymers play a central role in shaping our world across various fields, but their heavy reliance on petrochemicals poses climate change, environmental and health risks. To address and alleviate these issues, transitioning to sustainable polymers, sourced ...

EPFL2024

Homogeneous Environmental Selection Structures the Bacterial Communities of Benthic Biofilms in Proglacial Floodplain Streams

Leïla Ezzat, Tom Ian Battin, Hannes Markus Peter, Jade Brandani, Tyler Joe Kohler, Stylianos Fodelianakis, Massimo Bourquin, Susheel Bhanu Busi, Grégoire Marie Octave Edouard Michoud

Streams draining proglacial floodplains harbor benthic biofilms comprised of diverse microbial communities. These high-mountain ecosystems are rapidly changing with climate warming, and it is therefore critical to better understand the mechanisms underlyin ...

AMER SOC MICROBIOLOGY2023

Biofilm morphogenesis on soft hydrogels

Alice Cont

Bacteria often colonize their environment in the form of surface attached multicellular communities called biofilms. Biofilms grow from surface-attached cells that undergo division while self-embedding in a viscoelastic matrix. Biofilms grow at the surface ...

EPFL2023

Bulk size-resolved chemical composition and mass concentration of non-refractory submicron aerosols measured in the Swiss container during MOSAiC 2019/2020

Benjamin Jérémy Laurent Heutte, Julia Schmale, Ivo Fabio Beck, Lubna Dada, Hélène Paule Angot, Imad El Haddad

This dataset contains the bulk size-resolved chemical composition and mass concentration of non-refractory submicron aerosols (NR-PM1) measured during the MOSAiC expedition from October 2019 to July 2020. These include the mass concentrations of sulfate (S ...

Zenodo2023

The biofilm ecology of proglacial floodplain streams

Jade Brandani

Glacial forelands figure among the most dynamic landscapes on Earth, and their formation is currently accelerating given glacier shrinkage. Draining these forelands are streams hosting unique microbial communities, which have the capacity to impact both th ...

EPFL2023

Influence of Microplastics on Microbial Structure, Function, and Mechanical Properties of Stream Periphyton

Renata Behra, Kristin Schirmer, Ahmed Tlili

Periphyton is a freshwater biofilm composed of prokaryotic and eukaryotic communities that occupy rocks and sediments, forming the base of the food web and playing a key role in nutrient cycling. Given the large surface that periphyton comprises, it may al ...

FRONTIERS MEDIA SA2022

Probing the growth and mechanical properties of Bacillus subtilis biofilms through genetic mutation strategies

Chen Zhang, Lei Wang

Bacterial communities form biofilms on various surfaces by synthesizing a cohesive and protective extracellular matrix, and these biofilms protect microorganisms against harsh environmental conditions. Bacillus subtilis is a widely used experimental specie ...

KEAI PUBLISHING LTD2022

Viral diversity is linked to bacterial community composition in alpine stream biofilms

Tom Ian Battin, Paraskevi Pramateftaki, Hannes Markus Peter, Meriem Bekliz

Biofilms play pivotal roles in fluvial ecosystems, yet virtually nothing is known about viruses in these communities. Leveraging an optimized sample-to-sequence pipeline, we studied the spatiotemporal turnover of dsDNA viruses associated with stream biofil ...

Springer2022

The influence of the crowding assumptions in biofilm simulations

Vassily Hatzimanikatis, Liliana Angeles Martinez

Author summary In nature, many organisms grow in crowded biofilms that protect against stressful conditions, making their control/eradication a challenge. Modeling these microbial systems is a valuable tool for studying the interactions among cells and exp ...

2021

Microdiversity characterizes prevalent phylogenetic clades in the glacier-fed stream microbiome

Vincent Henri De Staercke, Tom Ian Battin, Paraskevi Pramateftaki, Hannes Markus Peter, Jade Brandani, Matteo Tolosano, Michail Styllas, Tyler Joe Kohler, Stylianos Fodelianakis, Massimo Bourquin, Susheel Bhanu Busi

Glacier-fed streams (GFSs) are extreme and rapidly vanishing ecosystems, and yet they harbor diverse microbial communities. Although our understanding of the GFS microbiome has recently increased, we do not know which microbial clades are ecologically succ ...

SPRINGERNATURE2022

Structural Basis of Ligand Selectivity by a Bacterial Adhesin Lectin Involved in Multispecies Biofilm Formation

Corey Alfred Stevens

Carbohydrate recognition by lectins governs critical host-microbe interactions. MpPA14 (Marinomonas primoryensis PA14 domain) lectin is a domain of a 1.5-MDa adhesin responsible for a symbiotic bacterium-diatom interaction in Antarctica. Here, we show that ...

Amer Soc Microbiology2021

Selection of Water-Soluble Chitosan by Microwave-Assisted Degradation and pH-Controlled Precipitation

Sandrine Gerber, Céline Marie Anne Journot, Yann Lavanchy, Laura Camille Louise Nicolle

In the field of gene therapy, chitosan (CS) gained interest for its promise as a non-viral DNA vector. However, commercial sources of CS lack precise characterization and do not generally reach sufficient solubility in aqueous media for in vitro and in viv ...

2020

Observation of New Resonances in the Lambda(0)(b)pi(+)pi(-) System

Christoph Frei, Peter Clarke, Aurelio Bay, Minh Tâm Tran, Marc-Olivier Bettler, François Fleuret, Tatsuya Nakada, Guido Haefeli, Niko Neufeld, Olivier Schneider, Hans Dijkstra, Frédéric Teubert, Gerhard Raven, Mingkui Wang, Chitsanu Khurewathanakul, Frédéric Blanc, Matthew Needham, Axel Kuonen, Olivier Göran Girard, Liang Sun, Maxime Schubiger, Thibaud Humair, Xiaoqing Zhou, Hang Yin, Xiaoxue Han, Greig Alan Cowan, Paolo Durante, Guillaume Max Pietrzyk, Matthieu Philippe Luther Marinangeli, Vladislav Balagura, Lino Ferreira Lopes, Zhirui Xu, Mark Tobin, Xing Li, Victor Coco, Violaine Bellée, Mirco Dorigo, Yu Zheng, Alexey Boldyrev, Simone Meloni, Vincenzo Battista, , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , ,

The underappreciated role of nonvolatile cations in aerosol ammonium-sulfate molar ratios

Hairun Guo, Athanasios Nenes

Overprediction of fine-particle ammonium-sulfate molar ratios (R) by thermodynamic models is suggested as evidence for interactions with organic constituents that inhibit the equilibration of gas-phase ammonia with aerosol sulfate and questions the equilib ...

Copernicus Publications2018

Measuring air borne nanoparticles for characterizing hyphenated RDD-SMPS-ICPMS instrumentation

Christian Ludwig, Adrian Hess, Mohamed Tarik

Scanning Mobility Particle Sizer (SMPS) and Inductively Coupled Plasma Mass Spectrometry (ICPMS), complemented by a Rotating Disk Diluter (RDD) to a hyphenated RDD-SMPS-ICPMS measuring setup, allow online and simultaneous determination of size distribution ...

Elsevier2016

Effect of Surface Charge on Surface-Initiated Atom Transfer Radical Polymerization from Cellulose Nanocrystals in Aqueous Media

Harm-Anton Klok, Justin Orazio Zoppe, Xingyu Xu

Cellulose nanocrystals (CNCs) with different charge densities were utilized to examine the role of electrostatic interactions on surface-initiated atom transfer radical polymerization (SI-ATRP) in aqueous media. To this end, growth of hydrophilic uncharged ...

American Chemical Society2016

Time-resolved size and element analysis of gas-borne nanoparticles

Adrian Hess

Physical and chemical characterization of gas-borne particles in the nanometer to sub-micrometer size range is important in many applications, such as nanoparticle related health studies, the monitoring of powder or dust distribution processes, assessing t ...

EPFL2016

Middle-down approaches for mass spectrometry-based protein identification and characterization

Kristina Srzentic

Mass spectrometry (MS) has emerged over the last two decades as the analytical technique of choice in systems-level protein studies, known as proteomics. Two are the MS-based approaches generally applied to proteomics: bottom-up (BU), which relies on the p ...

EPFL2016

Continuum percolation of polydisperse hyperspheres in infinite dimensions

Claudio Grimaldi

We analyze the critical connectivity of systems of penetrable d-dimensional spheres having size distributions in terms of weighed random geometrical graphs, in which vertex coordinates correspond to random positions of the sphere centers, and edges are for ...

Amer Physical Soc2015

Correlation between flocculation and adsorption of cationic polyacrylamides on precipitated calcium carbonate

David Hunkeler, Jutta Christine Wandrey, Hamideh Ahmadloo, Ineide Cruz Pinheiro

The study of each stage of the flocculation process is essential to better understand and predict flocculation mechanisms. The adsorption of cationic polyacrylamide derivatives (C-PAM) onto precipitated calcium carbonate (PCC) has been investigated systema ...

Inst Chemical Engineers2015