Publication

Detection and sequence/structure mapping of biophysical constraints to protein variation in saturated mutational libraries and protein sequence alignments with a dedicated server

Graph Chat

Chat with Graph Search

Ask any question about EPFL courses, lectures, exercises, research, news, etc. or try the example questions below.

DISCLAIMER: The Graph Chatbot is not programmed to provide explicit or categorical answers to your questions. Rather, it transforms your questions into API requests that are distributed across the various IT services officially administered by EPFL. Its purpose is solely to collect and recommend relevant references to content that you can explore to help you answer your questions.

Detection and sequence/structure mapping of biophysical constraints to protein variation in saturated mutational libraries and protein sequence alignments with a dedicated server

Chat with Graph Search

Genome-wide allele-specific expression in multi-tissue samples from healthy male baboons reveals the transcriptional complexity of mammals

Antagonism as a Foraging Strategy in Microbial Communities

Opportunities and challenges in design and optimization of protein function

Investigating the intra-molecular and inter-molecular effects of post-translational modifications on intrinsically disordered protein regions and structured protein regions

Modulating Weak Protein-Protein Cross-Interactions by the Addition of Free Amino Acids at Millimolar Concentrations

Generative power of a protein language model trained on multiple sequence alignments

Impact of phylogeny on structural contact inference from protein sequence data

Evaluation of genetic demultiplexing of single-cell sequencing data from model species

Protein language models trained on multiple sequence alignments learn phylogenetic relationships

A Geometric Transformer for Structural Biology: Development and Applications of the Protein Structure Transformer

Extracting phylogenetic dimensions of coevolution reveals hidden functional signals

A generic framework for hierarchical de novo protein design

Supplementary dataset for Enzyme promiscuous profiles for protein sequence and reaction annotation

fGOT: Graph Distances Based on Filters and Optimal Transport

De novo protein design by inversion of the AlphaFold structure prediction network

De novo designed proteins: a study in engineering novel folds and functions

Statistical potentials from the Gaussian scaling behaviour of chain fragments buried within protein globules

A new age in protein design empowered by deep learning

Scaffolding protein functional sites using deep learning

Construction of sequencing libraries from a ribonucleic acid (rna) using tailing and ligation of cdna (tlc)