Homology modelingHomology modeling, also known as comparative modeling of protein, refers to constructing an atomic-resolution model of the "target" protein from its amino acid sequence and an experimental three-dimensional structure of a related homologous protein (the "template"). Homology modeling relies on the identification of one or more known protein structures likely to resemble the structure of the query sequence, and on the production of an alignment that maps residues in the query sequence to residues in the template sequence.
IsotopomerIsotopomers or isotopic isomers are isomers which differ by isotopic substitution, and which have the same number of atoms of each isotope but in a different arrangement. For example, CH3OD and CH2DOH are two isotopomers of monodeuterated methanol. The molecules may be either structural isomers (constitutional isomers) or stereoisomers depending on the location of the isotopes. Isotopomers have applications in areas including nuclear magnetic resonance spectroscopy, reaction kinetics, and biochemistry.
Boolean ringIn mathematics, a Boolean ring R is a ring for which x2 = x for all x in R, that is, a ring that consists only of idempotent elements. An example is the ring of integers modulo 2. Every Boolean ring gives rise to a Boolean algebra, with ring multiplication corresponding to conjunction or meet ∧, and ring addition to exclusive disjunction or symmetric difference (not disjunction ∨, which would constitute a semiring). Conversely, every Boolean algebra gives rise to a Boolean ring.
Wave equationThe (two-way) wave equation is a second-order linear partial differential equation for the description of waves or standing wave fields - as they occur in classical physics - such as mechanical waves (e.g. water waves, sound waves and seismic waves) or electromagnetic waves (including light waves). It arises in fields like acoustics, electromagnetism, and fluid dynamics. Single mechanical or electromagnetic waves propagating in a pre-defined direction can also be described with the first-order one-way wave equation, which is much easier to solve and also valid for inhomogeneous media.
Protein structure predictionProtein structure prediction is the inference of the three-dimensional structure of a protein from its amino acid sequence—that is, the prediction of its secondary and tertiary structure from primary structure. Structure prediction is different from the inverse problem of protein design. Protein structure prediction is one of the most important goals pursued by computational biology; and it is important in medicine (for example, in drug design) and biotechnology (for example, in the design of novel enzymes).
Fine-structure constantIn physics, the fine-structure constant, also known as the Sommerfeld constant, commonly denoted by α (the Greek letter alpha), is a fundamental physical constant which quantifies the strength of the electromagnetic interaction between elementary charged particles. It is a dimensionless quantity, independent of the system of units used, which is related to the strength of the coupling of an elementary charge e with the electromagnetic field, by the formula 4πε_0ħcα = e^2. Its numerical value is approximately 0.
Carbon dioxideCarbon dioxide (chemical formula ) is a chemical compound made up of molecules that each have one carbon atom covalently double bonded to two oxygen atoms. It is found in the gas state at room temperature, and as the source of available carbon in the carbon cycle, atmospheric is the primary carbon source for life on Earth. In the air, carbon dioxide is transparent to visible light but absorbs infrared radiation, acting as a greenhouse gas. Carbon dioxide is soluble in water and is found in groundwater, lakes, ice caps, and seawater.
WaveIn physics, mathematics, engineering, and related fields, a wave is a propagating dynamic disturbance (change from equilibrium) of one or more quantities. Waves can be periodic, in which case those quantities oscillate repeatedly about an equilibrium (resting) value at some frequency. When the entire waveform moves in one direction, it is said to be a traveling wave; by contrast, a pair of superimposed periodic waves traveling in opposite directions makes a standing wave.
Bohr modelIn atomic physics, the Bohr model or Rutherford–Bohr model of the atom, presented by Niels Bohr and Ernest Rutherford in 1913, consists of a small, dense nucleus surrounded by orbiting electrons. It is analogous to the structure of the Solar System, but with attraction provided by electrostatic force rather than gravity, and with the electron energies quantized (assuming only discrete values).
Peak waterPeak water is a concept that underlines the growing constraints on the availability, quality, and use of freshwater resources. Peak water was defined in 2010 by Peter Gleick and Meena Palaniappan. They distinguish between peak renewable, peak non-renewable, and peak ecological water to demonstrate the fact that although there is a vast amount of water on the planet, sustainably managed water is becoming scarce. Lester R.
GrapheneGraphene (ˈgræfiːn) is an allotrope of carbon consisting of a single layer of atoms arranged in a hexagonal lattice nanostructure. The name is derived from "graphite" and the suffix -ene, reflecting the fact that the graphite allotrope of carbon contains numerous double bonds. Each atom in a graphene sheet is connected to its three nearest neighbors by σ-bonds and a delocalised π-bond, which contributes to a valence band that extends over the whole sheet.
TorusIn geometry, a torus (: tori or toruses) is a surface of revolution generated by revolving a circle in three-dimensional space one full revolution about an axis that is coplanar with the circle. The main types of toruses include ring toruses, horn toruses, and spindle toruses. A ring torus is sometimes colloquially referred to as a donut or doughnut. If the axis of revolution does not touch the circle, the surface has a ring shape and is called a torus of revolution, also known as a ring torus.
