Publications related to Slice-by-Slice versus Fully 3D Reconstruction for Parallel-Beam x-Ray Microtomography

Related publications (30)

Maximum likelihood bolometry for ASDEX upgrade experiments

Olivier Claude Martin Février, Riccardo Rossi

Bolometry is an essential diagnostic for calculating the power balances and for the understanding of different physical aspects of tokamak experiments. The reconstruction method based on the Maximum Likelihood (ML) principle, developed initially for JET, h ...

Iop Publishing Ltd2023

Exploring Novel Modalities for Optical Diffraction Tomography

Amirhossein Saba Shirvan

In the past decade, optical diffraction tomography has gained a lot of attention for its ability to create label-free three-dimensional (3D) images of the refractive index distribution of biological samples using scattered fields measured through holograph ...

EPFL2023

3D reconstruction of curvilinear one-dimensional objects viewed in transmission electron microscopy

Gulnaz Ganeeva

To obtain a more complete understanding of material microstructure at the nanoscale and to gain profound insights into their properties, there is a growing need for more efficient and precise methods that can streamline the process of 3D imaging using a tr ...

EPFL2023

Large Steps in Inverse Rendering of Geometry

Wenzel Alban Jakob, Baptiste Alexandre Marie Philippe Claude Nicolet

Inverse reconstruction from images is a central problem in many scientific and engineering disciplines. Recent progress on differentiable rendering has led to methods that can efficiently differentiate the full process of image formation with respect to mi ...

ASSOC COMPUTING MACHINERY2021

Temporally-Coherent Surface Reconstruction via Metric-Consistent Atlases

Pascal Fua, Mathieu Salzmann, Shaifali Parashar, Jan Bednarík

We propose a method for the unsupervised reconstruction of a temporally-coherent sequence of surfaces from a sequence of time-evolving point clouds, yielding dense, semantically meaningful correspondences between all keyframes. We represent the reconstruct ...

IEEE2021

A disaggregate choice-based approach to find ε-equilibria of oligopolistic markets

Michel Bierlaire, Virginie Janine Camille Lurkin, Stefano Bortolomiol

We present a general framework to find ε-equilibrium solutions of oligopolistic markets in which demand is modeled at the disaggregate level using discrete choice models. Consumer choices are modeled according to random utility theory, and the choice proba ...

2021

Compress-and-restart block Krylov subspace methods for Sylvester matrix equations

Kathryn Dianne Lund, Daniel Kressner, Stefano Massei

Block Krylov subspace methods (KSMs) comprise building blocks in many state-of-the-art solvers for large-scale matrix equations as they arise, for example, from the discretization of partial differential equations. While extended and rational block Krylov ...

2020

Multi-CryoGAN: Reconstruction of Continuous Conformations in Cryo-EM Using Generative Adversarial Networks

Michaël Unser, Harshit Gupta, Thanh Hai Phan, Jaejun Yoo

We propose a deep-learning-based reconstruction method for cryo-electron microscopy (Cryo-EM) that can model multiple conformations of a nonrigid biomolecule in a standalone manner. Cryo-EM produces many noisy projections from separate instances of the sam ...

Springer, Cham2020

Multi space reduced basis preconditioners for parametrized Stokes equations

Alfio Quarteroni, Simone Deparis, Andrea Manzoni, Niccolò Dal Santo

We introduce a two-level preconditioner for the efficient solution of large scale saddle point linear systems arising from the finite element (FE) discretization of parametrized Stokes equations. This preconditioner extends the Multi Space Reduced Basis (M ...

PERGAMON-ELSEVIER SCIENCE LTD2019

3D Reconstruction of Optical Diffraction Tomography Based on a Neural Network Model

Morteza Hasani Shoreh

Optical tomography has been widely investigated for biomedical imaging applications. In recent years, it has been combined with digital holography and has been employed to produce high quality images of phase objects such as cells. In this Thesis, we look ...

EPFL2018

3D Bpconvnet To Reconstruct Parallel Mri

Michaël Unser, Kyong Hwan Jin

In recent years, compressed sensing techniques have been applied to the reconstruction of parallel magnetic resonance (MR) images. Particularly for 3D MR signal, it is crucial to acquire fewer samples to reduce the distortions caused by long-time acquisiti ...

IEEE2018

Learning Tomography Assessed Using Mie Theory

Michaël Unser, Demetri Psaltis, Joowon Lim

In optical diffraction tomography, the multiply scattered field is a nonlinear function of the refractive index (RI) of the object. The Rytov method relies on a single-scattering propagation model and is commonly used to reconstruct images. Recently, a rec ...

American Physical Society (APS)2018

Determination of 2D poloidal maps of the intrinsic W density for transport studies in JET-ILW

Olivier Sauter, Martinus Adela Maria Gijs, Jonathan Graves, Ambrogio Fasoli, Stefano Coda, Basil Duval, Henri Weisen, Richard Pitts, Yves Martin, Javier García Hernández, Duccio Testa, Miguel Fernández Ruiz, Nicola Vianello, Robin Humphry-Baker, Sun Hee Kim, Federico Nespoli, Patrick Blanchard, Alessandro Pau, David Pfefferlé, Davide Galassi, Jonathan Marc Philippe Faustin, Cristian Sommariva, Hamish William Patten, Samuel Lanthaler, Jan Horacek, Yann Camenen, Bruno Emanuel Ferreira De Sousa Correia, José Pedro Rebelo Ferreira Marques, Mikhail Maslov, Marco Wischmeier, Dalziel Joseph Wilson, Liang Yao, Daniel Scott Alessi, Arnout Lodewijk M Beckers, Ana Francisca Leal Silva Soares, Jonnathan Cesar Hidalgo Acosta, Antonio José Pereira de Figueiredo, Partha Dutta, Pierre-Thomas Paul Brun, Pedro Camilo de Oliveira e Silva, Alberto Hernando de Castro, Julio Rodriguez, Vlad Trifa, Li Shuai, Rebecca Hill

The experimental method developed at ASDEX Upgrade for the determination of the intrinsic tungsten (W) density profile coupling data from the soft X-ray (SXR) diagnostic and vacuum-ultra-violet (VUV) spectroscopy has been upgraded for application to JET pl ...

2018

A Novel Iterative Method To Approximate Structured Singular Values

Daniel Kressner

A novel method for approximating structured singular values (also known as values) is proposed and investigated. These quantities constitute an important tool in the stability analysis of uncertain linear control systems as well as in structured eigenvalue ...

Siam Publications2017

Reconstruction using approximate message passing methods

Paul Hurley, Matthieu Martin Jean-André Simeoni

The present invention is notably directed to a computer-implemented method for image reconstruction. The method comprises: accessing elements that respectively correspond to measurement values, which can be respectively mapped to measurement nodes; and per ...

2017

A numerical investigation of multi space reduced basis preconditioners for parametrized elliptic advection-diffusion equations

Simone Deparis, Andrea Manzoni, Niccolò Dal Santo

We analyze the numerical performance of a preconditioning technique recently proposed in [1] for the efficient solution of parametrized linear systems arising from the finite element (FE) discretization of parameter-dependent elliptic partial differential ...

Walter de Gruyter GmbH2017

Adaptive WENO methods based on radial basis functions reconstruction

Jan Sickmann Hesthaven, Caterina Bigoni

We explore the use of radial basis functions (RBF) in the weighted essentially non-oscillatory (WENO) reconstruction process used to solve hyperbolic conservation laws, resulting in a numerical method of arbitrarily high order to solve problems with discon ...

Springer Verlag2017

Sparsity-Based Data Reconstruction Models for Biomedical Imaging

Emrah Bostan

We propose new regularization models to solve inverse problems encountered in biomedical imaging applications. In formulating mathematical schemes, we base our approach on the sparse signal processing principles that have emerged as a central paradigm in t ...

EPFL2016

Fault Tolerance in the Parareal Method

Jan Sickmann Hesthaven, Allan Svejstrup Nielsen

Parallel-in-time integration is an often advocated approach for extracting parallelism in the solution of PDEs beyond what is possible using spacial domain decomposition tech- niques. Due to the comparatively low parallel efficiency of parallel-in-time int ...

Assoc Computing Machinery2016

An Algorithmic Framework for Mumford-Shah Regularization of Inverse Problems in Imaging

Martin Kurt Storath

The Mumford-Shah model is a very powerful variational approach for edge preserving regularization of image reconstruction processes. However, it is algorithmically challenging because one has to deal with a non-smooth and non-convex functional. In this pap ...

Iop Publishing Ltd2015