Vincent Roland Julien Gardeux

About
Privacy
Disclaimer

Graph Chatbot

Related publications (28)

Page 2 of 2

Disparate temperature-dependent virus-host dynamics for SARS-CoV-2 and SARS-CoV in the human respiratory epithelium

Bastien Mangeat, Bart Deplancke, Julie Marie Russeil, Daniel Alpern, Vincent Roland Julien Gardeux, Elisa Cora, Jörn Pezoldt

Since its emergence in December 2019, Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) has spread globally and become a major public health burden. Despite its close phylogenetic relationship to SARS-CoV, SARS-CoV-2 exhibits increased human-to- ...

2021

Optimised set of oligonucleotides for bulk rna barcoding and sequencing

Bart Deplancke, Riccardo Dainese, Daniel Alpern, Vincent Roland Julien Gardeux

The present invention relates generally to the field of nucleic acid sequencing and provides oligonucleotide molecules and barcodes contained therein. These oligonucleotide molecules and barcodes molecules are useful in sequencing to identify and resolve e ...

2023

Context transcription factors establish cooperative environments and mediate enhancer communication

Bart Deplancke, Julie Marie Russeil, Vincent Roland Julien Gardeux, Olga Pushkarev, Judith Franziska Kribelbauer, Guido Van Mierlo

Many enhancers control gene expression by assembling regulatory factor clusters, also referred to as condensates. This process is vital for facilitating enhancer communication and establishing cellular identity. However, how DNA sequence and transcription ...

2024

BRB-seq: ultra-affordable high-throughput transcriptomics enabled by bulk RNA barcoding and sequencing

David Hacker, Bastien Mangeat, Bart Deplancke, Antonio Carlos Alves Meireles Filho, Julie Marie Russeil, Daniel Alpern, Vincent Roland Julien Gardeux

Despite its widespread use, RNA-seq is still too laborious and expensive to replace RT-qPCR as the default gene expression analysis method. We present a novel approach, BRB-seq, which uses early multiplexing to produce 3 cDNA libraries for dozens of sample ...

2019

OCT4 and SOX2 are required at the M-G1 transition to re-establish chromatin accessibility at enhancers in pluripotent stem cells

Cédric Deluz, David Michael Suter, Antonio Carlos Alves Meireles Filho, Torgil Elias Friman, Vincent Roland Julien Gardeux

MARY ANN LIEBERT, INC2018

A Label-Free, High-Throughput Phenotypic Screen Of Adipocytic Differentiation Modulators To Accelerate Hematopoietic Recovery

Gerardo Turcatti, Damiano Banfi, Bart Deplancke, Fabien Kuttler, Aurélien Laurent Jean-Charles Oggier, Pernille Yde Rainer, Vasco Ledebur de Antas de Campos, Vincent Roland Julien Gardeux

ELSEVIER SCIENCE INC2022

ASAP 2020 update: an open, scalable and interactive web-based portal for (single-cell) omics analyses

Bart Deplancke, Fabrice David, Vincent Roland Julien Gardeux, Maria Litovchenko

Single-cell omics enables researchers to dissect biological systems at a resolution that was unthinkable just 10 years ago. However, this analytical revolution also triggered new demands in 'big data' management, forcing researchers to stay up to speed wit ...

2020

Deterministic scRNA-seq captures variation in intestinal crypt and organoid composition

Matthias Lütolf, Bart Deplancke, Saba Rezakhani, Esther Amstad, Riccardo Dainese, Julie Marie Russeil, Antonius Chrisnandy, Vincent Roland Julien Gardeux, Johannes Julius Bues, Marjan Biocanin, Rita Sarkis, Jörn Pezoldt, Wouter Jozef L Saelens

DisCo is a deterministic droplet microfluidics tool for single-cell analysis on low cell input samples, which is demonstrated to profile individual intestinal organoids and in vivo-derived small tissues. ...

Nature Publishing Group2022