Hannes Markus PeterCurrent work
I am a microbial ecologist and mainly interested in factors shaping bacterial communities and functioning in freshwater ecosystems. I use combinations of field observations, experiments and molecular techniques to test hypotheses regarding the assembly of microbial communities, the influence of environmental variability and relationships between diversity and funcioning. I enjoy working in alpine environments, which are sensitive to climate change and represent excellent model systems.
Teaching
Berend SmitBerend Smit received an MSc in Chemical Engineering in 1987 and an MSc in Physics both from the Technical University in Delft (the Netherlands). He received in 1990 cum laude PhD in Chemistry from Utrecht University (the Netherlands). He was a (senior) Research Physicists at Shell Research from 1988-1997, Professor of Computational Chemistry at the University of Amsterdam (the Netherlands) 1997-2007.
In 2004 Berend Smit was elected Director of the European Center of Atomic and Molecular Computations (CECAM) Lyon France. Since 2007 he is Professor of Chemical Engineering and Chemistry at U.C. Berkeley and Faculty Chemist at Materials Sciences Division, Lawrence Berkeley National Laboratory. Since 2014 he has been director of the Energy Center at EPFL.
Bruno Emanuel Ferreira De Sousa CorreiaThroughout my PhD and postdoctoral studies I was trained in world-renowned laboratories and institutions in the United States of America (University of Washington and The Scripps Research Institute). Very early in my scientific career I found out my fascination about protein structure and function. My PhD studies evolved in the direction of immunogen design and vaccine engineering which sparked my interest in the many needs and opportunities in vaccinology and translational research. My efforts resulted in an enlightening piece of work where for the first time, computationally designed immunogens elicited potent neutralizing antibodies. During my postdoctoral studies I joined a chemical biology laboratory at the Scripps Research Institute. In this stage I developed novel chemoproteomics methods for the identification of protein-small molecule interaction sites in complex proteomes. In March 2015, I joined the École Polytechnique Fédérale de Lausanne (EPFL) – Switzerland as a tenure track assistant professor. The focus of my research group is to develop computational tools for protein design with particular emphasis in applying these strategies to immunoengineering (e.g. vaccine and cancer immunotherapy). The activities in my laboratory focus on computational design methods development and experimental characterization of the designed proteins. Our laboratory has been awarded with 2 prestigious research grants from the European Research Council. Lastly, I have been awarded the prize for best teacher of Life sciences in 2019.
Bence DienesBence Dienes joined EPFL as a doctoral assistant of the soil biogeochemistry laboratory (SOIL) in February 2023. He aims to understand the fundamental principles and processes that govern the biogeochemical cycling of key elements in alpine soils. Bence holds a Bachelor's and a Master's degree in environmental sciences and biogesciences from the University of Lausanne. Passionate in mountains, he expanded his understanding in alpine habitats during his Master thesis and he was part of the GLORIA research te
Johanni Michael BreaTeaching & PhD PhD Students Aude Maier, Lucas Louis Gruaz, Flavio Martinelli Courses Artificial intelligence and society HUM-286 This course integrates social sciences and humanities with engineering sciences, and introduces students to the social, technical and political issues surrounding artificial intelligence. Biological data science II : machine learning BIO-322 Students understand basic concepts and methods of machine learning. They can describe them in mathematical
Paolo BenettinI was born in Padova, Italy, in 1986. After high school, I started the Environmental Engineering program at the University of Padova (Bachelor and Master), where I followed the 'soil protection' curriculum. During my Master studies I spent a semester as Erasmus student at Wageningen University (Wageningen, the Netherlands) to follow courses in Hydrology. After graduation, I decided to bring my education further and I started a Ph.D. at the civil and environmental engineering department at the University of Padova. My Ph.D. thesis focused on hydrologic transport and travel time distributions at the catchment scale. My contribution to the subject included both new theoretical formulations and extensive numerical applications to real catchments. During my Ph.D., I also spent 7 months as visiting research fellow at Virginia Tech University (Blacksburg, USA). Since I arrived at EPFL as post-doc in 2015, I started being involved in field and experimental activities, which allowed me to learn about practical experimental problems. In 2017 I had the opportunity to by hired by the ECHO laboratory as a permanent scientist, conducting research in the field of catchment hydrology.
André AnjosExpertise
Reproducible ResearchPattern RecognitionImage ProcessingMachine LearningBiometrics
Short bio
André Anjos received his Ph.D. degree in signal processing in 2006 studying the application of neural nets and statistical methods for particle recognition in the context of High-Energy Physics experiments at Large Hadron Collider at CERN, Switzerland. He joined the Idiap Research Institute in 2010 where he works with biosignal processing and biometrics applications. He currently heads the Biosignal Proces
Maud EhrmannMaud Ehrmann is a research scientist at EPFL’s Digital Humanities Laboratory lead by Prof.
Frédéric Kaplan
. She holds a PhD in Computational Linguistics from the Paris Diderot Universtiy (Paris 7) and has been engaged in a large number of scientific projects centred on information extraction and text analysis, both for present-time and historical documents. Her main research interests span Natural Language Processing and Digital Humanities and include, among others, historical text annotation, historical data processing and representation, named entity recognition, and multilingual linguistic resources creation.
Her current work at the DHLAB focuses on
‘impresso - Media Monitoring of the Past’
, a SNF sinergia project she initiated with
Marten Düring
(
C2DH
) and
Simon Clematide
(
ICL
) and which aims at enabling critical analysis of historical newspapers. In addition to the overall project management, her contributions to this project include system design and data management, annotation and benchmarking and named entity processing. Besides, she participates to the activities of the
Venice Time Machine
, working particularly on information extraction and knowledge representation tasks. Previously, she worked on the
Garzoni
project where she supervised and contributed to the development of a web-based transcription and annotation interface - in collaboration with Orlin Topalov, and built a linked data-based historical knowledge base. She also contributed to the
Le Temps Digital Archives project
.
Prior to joining the DHLAB, she worked at the
Linguistics Computing Laboratory
at the Sapienza University of Rome with Roberto Navigli, where she worked on the
BabelNet
resource - a very large multilingual encyclopaedic dictionary and semantic network - and contributed to the
LIDER
project. Before that, she has been working for four years at the European Commission’s Joint Research Centre in Ispra, Italy, as member of the OPTIMA unit (now
Text and Data mining
unit), which develops innovative and application-oriented solutions for retrieving and extracting information from the Internet with a focus on high multilinguality. Together with Erik van der Goot,
Ralf Steinberger
, Hristo Tanev, Leo della Rocca and many others, she contributed to the development of the
Europe Media Monitor
(EMM). Prior, she worked at the Xerox Europe Research Centre in Grenoble, France (now
Naver Labs Europe
) in the Parsing & Semantics group led by Frédérique Segond, first as PhD candidate supported through a CIFRE grant under the supervision of
Caroline Brun
and
Bernard Victorri
, then as a post-doctoral researcher. There her research focused mainly on the automatic processing and fine-grained analysis of entities of interest, specifically named entities and temporal expressions.
Tom Ian BattinTeaching & PhD PhD Students Zhe Liu, Aleksei Dukat, Martin Boutroux, Jingyi Hou, Léa Francomme, Stefan Eckensperger Past EPFL PhD Students Amin Niayifar, David Scheidweiler, Asa Lovisa Viktoria Horgby, Marta Boix Canadell, Pier Luigi Segatto, Anna Depetris, Jade Brandani, Massimo Bourquin, Jonas Paccolat, David Touchette Past EPFL PhD Students as codirector Jeremy Wong Courses Aquatic ecosystems ENV-321 Inland waters are now being recognized are major players of global biogeochemical cycle
Loris Di NataleExpertise
(Deep) Machine Learning, (Deep) Reinforcement Learning, Building Control
Elena VagnoniElena Vagnoni graduated in Mechanical Engineering from the Politecnico of Milan in 2013, and she obtained her PhD in Mechanics at EPFL in 2018. Since 2022 she is the head of research projects group at the EPFL Technology Platform for Hydraulic Machines. Before her current position, she was a research assistant fellow at Johns Hopkins University and a SNSF-fellow guest scientist at the Norwegian University of Science and Technology. She is the Swiss expert for the Annex IX of the International Energy Agency
Paraskevi PramateftakiThroughout the years I focused on the molecular typing of microorganisms of various sources aiming to the accurate identification, classification and comparison of microorganisms and their subtypes. My experience extents on both eukaryotic (filamentous fungi/yeasts) and prokaryotic (Gram bacteria) microbes, on the development and application of culture dependent molecular approaches for the study of microbial populations and the use of bioinformatics tools for data mining. In my current position I am involved in the application of culture independent molecular methods for studying stream microbial biofilms.
Chen LiuI am a PhD candidate at the School of Computer and Communication Sciences (IC), École Polytechnique Fédérale de Lausanne (EPFL), supervised by Prof. Sabine Süsstrunk and co-supervised by Dr. Mathieu Salzmann. Previously, I obtained my Master Degree from École Polytechnique Fédérale de Lausanne (EPFL) in 2017 and Bachelor Degree from Tsinghua University in 2015, both in Computer Science.
