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Lecture

Mathematical Modeling in Chemistry and Biology

In course

MATH-106(f): Analysis II

Étudier les concepts fondamentaux d'analyse et le calcul différentiel et intégral des fonctions réelles de plusieurs variables. ...

Description

This lecture introduces mathematical modeling in chemistry and biology, focusing on dynamical systems. Topics include modeling chemical reactions, reversible reactions, and enzymatic reactions like Michaelis-Menten kinetics. The lecture also covers population dynamics models, such as the Lotka-Volterra competition model. Equilibrium states, stability analysis, and phase portraits are discussed to understand the behavior of different systems with varying parameters.

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Instructors (3)

David Valentin Strütt

Adélie Eliane Garin

Boris Buffoni

Official source

Ontological neighbourhood

Systems science and engineering

Systems theory: Chaos theory

Related concepts (32)

Phase portrait

In mathematics, a phase portrait is a geometric representation of the trajectories of a dynamical system in the phase plane. Each set of initial conditions is represented by a different point or curve. Phase portraits are an invaluable tool in studying dynamical systems. They consist of a plot of typical trajectories in the phase space. This reveals information such as whether an attractor, a repellor or limit cycle is present for the chosen parameter value.

Phase space

In dynamical systems theory and control theory, a phase space or state space is a space in which all possible "states" of a dynamical system or a control system are represented, with each possible state corresponding to one unique point in the phase space. For mechanical systems, the phase space usually consists of all possible values of position and momentum variables. It is the direct product of direct space and reciprocal space. The concept of phase space was developed in the late 19th century by Ludwig Boltzmann, Henri Poincaré, and Josiah Willard Gibbs.

Dynamical system

In mathematics, a dynamical system is a system in which a function describes the time dependence of a point in an ambient space, such as in a parametric curve. Examples include the mathematical models that describe the swinging of a clock pendulum, the flow of water in a pipe, the random motion of particles in the air, and the number of fish each springtime in a lake. The most general definition unifies several concepts in mathematics such as ordinary differential equations and ergodic theory by allowing different choices of the space and how time is measured.

Dynamical systems theory

Dynamical systems theory is an area of mathematics used to describe the behavior of complex dynamical systems, usually by employing differential equations or difference equations. When differential equations are employed, the theory is called continuous dynamical systems. From a physical point of view, continuous dynamical systems is a generalization of classical mechanics, a generalization where the equations of motion are postulated directly and are not constrained to be Euler–Lagrange equations of a least action principle.

Phase plane

In applied mathematics, in particular the context of nonlinear system analysis, a phase plane is a visual display of certain characteristics of certain kinds of differential equations; a coordinate plane with axes being the values of the two state variables, say (x, y), or (q, p) etc. (any pair of variables). It is a two-dimensional case of the general n-dimensional phase space. The phase plane method refers to graphically determining the existence of limit cycles in the solutions of the differential equation.

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