Projectively extended real lineIn real analysis, the projectively extended real line (also called the one-point compactification of the real line), is the extension of the set of the real numbers, , by a point denoted ∞. It is thus the set with the standard arithmetic operations extended where possible, and is sometimes denoted by or The added point is called the point at infinity, because it is considered as a neighbour of both ends of the real line. More precisely, the point at infinity is the limit of every sequence of real numbers whose absolute values are increasing and unbounded.
On-Line Encyclopedia of Integer SequencesThe On-Line Encyclopedia of Integer Sequences (OEIS) is an online database of integer sequences. It was created and maintained by Neil Sloane while researching at AT&T Labs. He transferred the intellectual property and hosting of the OEIS to the OEIS Foundation in 2009. Sloane is the chairman of the OEIS Foundation. OEIS records information on integer sequences of interest to both professional and amateur mathematicians, and is widely cited. , it contains over 360,000 sequences, making it the largest database of its kind.
One-sided limitIn calculus, a one-sided limit refers to either one of the two limits of a function of a real variable as approaches a specified point either from the left or from the right. The limit as decreases in value approaching ( approaches "from the right" or "from above") can be denoted: The limit as increases in value approaching ( approaches "from the left" or "from below") can be denoted: If the limit of as approaches exists then the limits from the left and from the right both exist and are equal.
Sequence homologySequence homology is the biological homology between DNA, RNA, or protein sequences, defined in terms of shared ancestry in the evolutionary history of life. Two segments of DNA can have shared ancestry because of three phenomena: either a speciation event (orthologs), or a duplication event (paralogs), or else a horizontal (or lateral) gene transfer event (xenologs). Homology among DNA, RNA, or proteins is typically inferred from their nucleotide or amino acid sequence similarity.
Conserved sequenceIn evolutionary biology, conserved sequences are identical or similar sequences in nucleic acids (DNA and RNA) or proteins across species (orthologous sequences), or within a genome (paralogous sequences), or between donor and receptor taxa (xenologous sequences). Conservation indicates that a sequence has been maintained by natural selection. A highly conserved sequence is one that has remained relatively unchanged far back up the phylogenetic tree, and hence far back in geological time.
Limit inferior and limit superiorIn mathematics, the limit inferior and limit superior of a sequence can be thought of as limiting (that is, eventual and extreme) bounds on the sequence. They can be thought of in a similar fashion for a function (see limit of a function). For a set, they are the infimum and supremum of the set's limit points, respectively. In general, when there are multiple objects around which a sequence, function, or set accumulates, the inferior and superior limits extract the smallest and largest of them; the type of object and the measure of size is context-dependent, but the notion of extreme limits is invariant.
Nucleic acid sequenceA nucleic acid sequence is a succession of bases within the nucleotides forming alleles within a DNA (using GACT) or RNA (GACU) molecule. This succession is denoted by a series of a set of five different letters that indicate the order of the nucleotides. By convention, sequences are usually presented from the 5' end to the 3' end. For DNA, with its double helix, there are two possible directions for the notated sequence; of these two, the sense strand is used.
Convergence testsIn mathematics, convergence tests are methods of testing for the convergence, conditional convergence, absolute convergence, interval of convergence or divergence of an infinite series . If the limit of the summand is undefined or nonzero, that is , then the series must diverge. In this sense, the partial sums are Cauchy only if this limit exists and is equal to zero. The test is inconclusive if the limit of the summand is zero. This is also known as the nth-term test, test for divergence, or the divergence test.
Ratio testIn mathematics, the ratio test is a test (or "criterion") for the convergence of a series where each term is a real or complex number and an is nonzero when n is large. The test was first published by Jean le Rond d'Alembert and is sometimes known as d'Alembert's ratio test or as the Cauchy ratio test. The usual form of the test makes use of the limit The ratio test states that: if L < 1 then the series converges absolutely; if L > 1 then the series diverges; if L = 1 or the limit fails to exist, then the test is inconclusive, because there exist both convergent and divergent series that satisfy this case.
Bounded setIn mathematical analysis and related areas of mathematics, a set is called bounded if it is, in a certain sense, of finite measure. Conversely, a set which is not bounded is called unbounded. The word "bounded" makes no sense in a general topological space without a corresponding metric. Boundary is a distinct concept: for example, a circle in isolation is a boundaryless bounded set, while the half plane is unbounded yet has a boundary. A bounded set is not necessarily a closed set and vice versa.
Geometric seriesIn mathematics, a geometric series is the sum of an infinite number of terms that have a constant ratio between successive terms. For example, the series is geometric, because each successive term can be obtained by multiplying the previous term by . In general, a geometric series is written as , where is the coefficient of each term and is the common ratio between adjacent terms.
Sequence alignmentIn bioinformatics, a sequence alignment is a way of arranging the sequences of DNA, RNA, or protein to identify regions of similarity that may be a consequence of functional, structural, or evolutionary relationships between the sequences. Aligned sequences of nucleotide or amino acid residues are typically represented as rows within a matrix. Gaps are inserted between the residues so that identical or similar characters are aligned in successive columns.
