Publications related to Sørensen–Dice coefficient

Compressed sensing (CS) MP2RAGE versus standard MPRAGE: A of derived brain volume measurements

Tobias Kober, Tom Hilbert, Gian Franco Piredda

Purpose: T1 Magnetization Prepared Two Rapid Acquisition Gradient Echo (MP2RAGE) with compress sensing (CS) has been proposed as an improvement of the standard MPRAGE sequence with multiple advantages including reduced acquisition time needed to provide a ...

ELSEVIER SCI LTD2022

RimNet: A deep 3D multimodal MRI architecture for paramagnetic rim lesion assessment in multiple sclerosis

Tobias Kober, Meritxell Bach Cuadra, Cristina Granziera, Francesco La Rosa

Objectives In multiple sclerosis (MS), the presence of a paramagnetic rim at the edge of non-gadolinium-enhancing lesions indicates perilesional chronic inflammation. Patients featuring a higher paramagnetic rim lesion burden tend to have more aggressive d ...

2020

Compressed sensing with signal averaging for improved sensitivity and motion artifact reduction in fluorine-19 MRI

Tobias Kober, Tom Hilbert, Ruud van Heeswijk, Jérôme Yerly

Fluorine-19 (F-19) MRI of injected perfluorocarbon emulsions (PFCs) allows for the non-invasive quantification of inflammation and cell tracking, but suffers from a low signal-to-noise ratio and extended scan time. To address this limitation, we tested the ...

WILEY2020

Comparison of crack segmentation using digital image correlation measurements and deep learning

Katrin Beyer, Radhakrishna Achanta, Michele Godio, Amir Rezaie

Reliable methods for detecting pixels that represent cracks from laboratory images taken for digital image correlation (DIC) are required for two main reasons. Firstly, the segmented crack maps are used as an input for some DIC methods that are based on di ...

2020

Personalized Anatomic Eye Model From T1-Weighted Volume Interpolated Gradient Echo Magnetic Resonance Imaging of Patients With Uveal Melanoma

Meritxell Bach Cuadra, Raphael Sznitman, Alessia Pica

Purpose: We present a 3-dimensional patient-specific eye model from magnetic resonance imaging (MRI) for proton therapy treatment planning of uveal melanoma (UM). During MRI acquisition of UM patients, the point fixation can be difficult and, together with ...

ELSEVIER SCIENCE INC2018

Semi-automatic 3D morphological reconstruction of neurons with densely branching morphology: Application to retinal All amacrine cells imaged with multi -photon excitation microscopy

Bas-Jan Zandt

Background: Accurate reconstruction of the morphology of single neurons is important for morphometric studies and for developing compartmental models. However, manual morphological reconstruction can be extremely time-consuming and error-prone and algorith ...

Elsevier2017

Automatic Segmentation of the Eye in 3D Magnetic Resonance Imaging: A Novel Statistical Shape Model for Treatment Planning of Retinoblastoma

Jean-Philippe Thiran, Meritxell Bach Cuadra, Raphael Sznitman, Alessia Pica

Purpose: Proper delineation of ocular anatomy in 3-dimensional (3D) imaging is a big challenge, particularly when developing treatment plans for ocular diseases. Magnetic resonance imaging (MRI) is presently used in clinical practice for diagnosis confirma ...

Elsevier Science Inc2015

Segmentation of head and neck lymph node regions for radiotherapy planning, using active contour based atlas registration

Jean-Philippe Thiran, Meritxell Bach Cuadra, Valérie Duay, Subrahmanyam Venkata Ravi Mohana Sai Gorthi, Nawal Houhou

In this paper, we present the segmentation of the head and neck lymph node regions using a new active contour based atlas registration model. We propose to segment the lymph node regions without directly including them in the atlas registration process; in ...

2009